| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4682 |
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| Symbol | |
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| ID | 5319324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1197145 |
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| End bp | 1198938 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776480 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313412 |
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| Protein GI | 150376816 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.582137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.306509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGAT TCCTATTGCC AGGTCTCGAA GTCCTTCGCG GCGCGCTAGG GCGCCAAATG
CGCCTGCTTC CGGCCGTCGT CATTCTCGGC CTTACCAGCG CTGCGCTCGA AGGCGCCGGC
ATCGGGCTCA TCATACCTAT GCTGAGCATC ATCGCCGGAG ACGAGCAGGC CACCGGCCTG
AGCGGCATCT CCGCTTATTT CCAGGGGATG GGGGAGGGCC TTGATGACGG CGAGCGCCTG
TTGGCGATTT CGGTAGCGGT GCTGGCTCTG ATCCTCCTCA AGAACGTTCT TTCCTTCGCC
AACACGCTGC TCACGACCTT CATATACGGC AAAGCCAGCC ACTCCGTCCG CAGCGCGCTC
TCGGATCAGC TGCTGCGGAT CGGATACCCC TTCTTCATGC AGCATAATCC GGGCCGGCTG
CTCAACATCA TATCCAATGA ATCGTGGCGC GCGTCCGACG CGATCCAGAC GGTGCTCGCC
GCGATCGTAC ATGGCTCAGC CGCGCTGATC CTTCTCGCCT TCCTGTTGCT CATGTCGTGG
CAGATGACGC TGTTCGTTGC GCTCGGCCTT GTCCTCGTCC AGCTTGCGCA TGCGGCCCTT
TCGGCGACGC TCAAGGGCCC GAGCCGCCAT GTCACTTCCT TCAACAGCGA GCTTTCCGCC
AGAATGCTGC ATCTGGTGCA CGCCGGGCGG CTGATCCGTG TCTTCGGTCA GGAACCGCGC
GAGAAGCAGG CATTCGATTC GGCCTCGGAC GCCGTTCGCC GGGCCGGCTT CGTGCTGCAA
TCACGACAGG GTGCGCTGCC GCCGCTCACC GAAGTTCTCC ATTCGGCGCT TTTTCTCGCG
GTGGTGGTTA GCGCCTGGTC CGTCGGCGTC AGCTTTCCGG TGATCGTCGC CTTCGTCGTC
CTGCTTTACC GCCTGCAGCC GCATGTGCGC GCCCTGCAGA TGTCCTGGAG CCAGATCCAG
GGCTGGAGCG GGTCGCTCGA AGAGGTGCGG TGGCTTCTCG ACTCGTCCGA CAAGCCGAAG
CCTCCGGAGG GCAAGACTCC GGTCGACGGC CTGCACGAGA TCTTGGTGTT CGATCGGGTG
ACCTTCCGTT ATCCAGGTTC CGAGGTGCGG CCAGTCGTTT TACGTTCCGC GAGCTTCGAA
ATCCGCAGCG GTCGTTCGAC GGCGATCATC GGTCGTTCAG GCGCGGGAAA GACCACGATC
GTCAATCTTC TGTGCCGTTT CGTCGAGCCG GATGAAGGAT GCATCCTCGT CGACGGGGTG
CCTCTGAGTG AGATCGATCC GATCCAGTGG CGGCGCCAGA TCGCCGTCGC CAGCCAGGAT
CTCGAACTGG TGGACGGCAG CATTCTGGAA AACATCACCT ATGGTCAGAG CGCCACCTTC
GCGGAAGCGG AACGCGCCGC GAAGCTCGCC GAGGCCCACG GCTTCATAGA GCAGCTGCCG
CAGGGCTATC AGACAGTCGT CGGTTACAGG GGGGCCAGCC TCTCGGCAGG GCAGAGGCAG
CGCATCGCGC TTGCCAGGGC CCTCGTGCGC GATCCGGCGA TCCTGATCCT AGACGAGGCA
ACCAATGCGG TTGACGGCCT GTCGGAGGCA GCGATCGTCG AGACGCTGCG ATTAAGAGCC
GGCAGACGCA CGACGATCGT GATCAGCCAT CACAGGAGCA CGATCTCGTT TTGCGACGAC
CTCGTGGTCC TTGGTTCCGG GCACGTGAAG GGTCAGGCCG CACTGGCCGA CGTCGCGTCG
CTCAGCATGG ATCAGCTATA CGAGCATGAG ACGCGCGCGG ACAGCGCAAC GTAA
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| Protein sequence | MRRFLLPGLE VLRGALGRQM RLLPAVVILG LTSAALEGAG IGLIIPMLSI IAGDEQATGL
SGISAYFQGM GEGLDDGERL LAISVAVLAL ILLKNVLSFA NTLLTTFIYG KASHSVRSAL
SDQLLRIGYP FFMQHNPGRL LNIISNESWR ASDAIQTVLA AIVHGSAALI LLAFLLLMSW
QMTLFVALGL VLVQLAHAAL SATLKGPSRH VTSFNSELSA RMLHLVHAGR LIRVFGQEPR
EKQAFDSASD AVRRAGFVLQ SRQGALPPLT EVLHSALFLA VVVSAWSVGV SFPVIVAFVV
LLYRLQPHVR ALQMSWSQIQ GWSGSLEEVR WLLDSSDKPK PPEGKTPVDG LHEILVFDRV
TFRYPGSEVR PVVLRSASFE IRSGRSTAII GRSGAGKTTI VNLLCRFVEP DEGCILVDGV
PLSEIDPIQW RRQIAVASQD LELVDGSILE NITYGQSATF AEAERAAKLA EAHGFIEQLP
QGYQTVVGYR GASLSAGQRQ RIALARALVR DPAILILDEA TNAVDGLSEA AIVETLRLRA
GRRTTIVISH HRSTISFCDD LVVLGSGHVK GQAALADVAS LSMDQLYEHE TRADSAT
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