| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4677 |
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| Symbol | |
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| ID | 5318134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1191216 |
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| End bp | 1192484 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776475 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001313407 |
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| Protein GI | 150376811 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.300302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0763833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAGCC TTACCGATCG CAAGAATGCA GCTATTTCCC GCGGTGTCGG CATGACCACG
CAGATCTACG CCGAGCGCGC GGAAAATGCC GAAATCTGGG ACAAGGAAGG CAACCGCTAC
ATCGACTTTG CCTCGGGGAT CGCCGTGGTA AATACGGGCC ACCGCCACCC AAAGGTGATC
GCCGCCGTCA AGGCGCAGCT CGACCGCTTC ACCCATACCT GCCACCAGGT CGTGCCCTAC
GAAAACTACG TGCATCTGGC CGAACGCCTG AACGCGATCG TGCCCGGCGA CTTCGCGAAG
AAGACGATTT TCGTTACGAC CGGTGCCGAG GCTGTCGAAA ACGCCGTCAA GATCGCGCGC
GCCGCGACCG GCCGCCAGGC GATCGTCGCC TTCGGCGGCG GTTTCCATGG CCGCACTTTC
ATGGGCATGG CGCTGACCGG CAAGGTCGTT CCATATAAGG TCGGCTTCGG CGCGATGCCG
GCGGATGTGT TCCACGCTCC CTTCCCGGTC GAGCTTCATG GCGTCAGCGT CGAGCAGTCG
TTGGCGGCGC TGAAGAAGCT CTTCGCTGCT GACGTCGATC CGAACCGCGT CGCTGCGATC
ATCATCGAGC CGGTTCAGGG CGAAGGCGGC TTCTATCCGG TTCCGACCGC CTTCATGAAG
GCGCTGCGCG AGATCTGCGA TCAGAACGGC ATCCTGCTGA TCGCCGACGA GGTCCAGACC
GGTTTTGCCC GGACCGGCAA GCTGCTTGCC ATGGAACATC ATGGCGTCGC ACCGGACCTG
ACGACAATGG CGAAGAGCCT CGCCGGCGGT TTCCCGCTCG CCGCCGTGAC TGGCCGCGCC
GAGATCATGG ACGCGCCCGG GCCGGGCGGC CTGGGCGGCA CCTACGGCGG CAATCCGCTC
GGCATCGCCG CCGCGCATGC CGTGCTCGAC GTGATTGCCG AGGAAAATCT ATGCGAACGG
GCGAACCAGC TCGGCAACCG GCTGAAGCAG CGCCTTGCGG CAATCCGTGA GAAGGCGCCG
GAGATCGTGG ATATCCGCGG ACCCGGCTTC ATGAACGCTG TCGAATTCAA CGATGTGAAG
ACGAACGTCC CTAGCGCCGA ATTCGCCAAT AAGGTCCGCC TCCTTGCCCT GGAAAAGGGG
CTCATCCTCT TGACCTGTGG CGTACACGGC AATGTCATCC GCTTTCTGGC GCCGATCACG
ATCCAGGATG ATGTCTTCGC GGAAGCCCTG GACATCCTCG AATCCTCGAT CCTCGAAGCG
CGCGGTTGA
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| Protein sequence | MTSLTDRKNA AISRGVGMTT QIYAERAENA EIWDKEGNRY IDFASGIAVV NTGHRHPKVI
AAVKAQLDRF THTCHQVVPY ENYVHLAERL NAIVPGDFAK KTIFVTTGAE AVENAVKIAR
AATGRQAIVA FGGGFHGRTF MGMALTGKVV PYKVGFGAMP ADVFHAPFPV ELHGVSVEQS
LAALKKLFAA DVDPNRVAAI IIEPVQGEGG FYPVPTAFMK ALREICDQNG ILLIADEVQT
GFARTGKLLA MEHHGVAPDL TTMAKSLAGG FPLAAVTGRA EIMDAPGPGG LGGTYGGNPL
GIAAAHAVLD VIAEENLCER ANQLGNRLKQ RLAAIREKAP EIVDIRGPGF MNAVEFNDVK
TNVPSAEFAN KVRLLALEKG LILLTCGVHG NVIRFLAPIT IQDDVFAEAL DILESSILEA
RG
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