| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4667 |
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| Symbol | |
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| ID | 5319342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1178508 |
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| End bp | 1179413 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776465 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_001313397 |
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| Protein GI | 150376801 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.263075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00095425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTTTAAGA AAGCCCTTCT GAGCGCTGTC GCGCTCTTCG CCCTCACCGG CCATGCCCAG
GCCGAAGAGC TAAAGGAATT TCGCGTCGGC ATCATCGGTG GCGAAAACGA AGCTGACCGC
CTTCGTAACT ACCAGTGCCT GGTCGACAAG CTCCCGGCAG CGATCGGCGT CGAGAAGGTC
TCTCTCTTCC CGGCCGCCGA CTATGACGGT GTGATCCAGG GCCTCCTCGG CGGCACGCTC
GATTACGCGG AACTCGGCGC CTCCGGTTAT GCCAAGATCT ATCTGGCCAA AGCCGATGCG
GTCGAGCCGA TCCTGACAAC CGTCCAGACC GACGGCTCCA CGGGCTATCA TTCGATCATG
GTCGCCCGGA AGGACTCCGG CATCACCAAG CTCGAAGACC TCAAGGGCAA GAAGCTCGGA
TTCGCCGATC CGGACTCGAC CTCGGGCTAC CTCGTTCCGC TCGTCACCCT GCCGGAAGCC
ATCGGCGCTC CGGTGAAGGA ATATTTCGGT GAAACCGGCT TCGGCGGCGG TCACGAAAAC
CTCGTTCTTG AGGTCGTGAA GGGCACCTTC GATGCCGGCA CAACCTTCGG CTCGGGCGTC
GGCGAGTTCA AGGACGGCTA CACCTCGGGC AACCTGCGCA AGATGGTCGA CAAGGGTATC
GTCGACATGA ACGACCTCGT CGAACTCTGG AAGTCGCCGT TGATCCCGAA CGGCCCGATC
GTCGTGCGTA CGGCATTGAA CGGCGACATG AAGGCCAAGT TCAAGCAGTT CATGATTGAT
CTGCCGAAGA CCGACGCCGC TTGCTTCTCC GCCATCCAGG GCGGTGATTT TACCGGCTTC
GTCGAAGTCA ACAGCGAATT CTACAAGCCG ATCATCGACG CCCGCAAGGC GACGATCGGC
GGCTGA
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| Protein sequence | MFKKALLSAV ALFALTGHAQ AEELKEFRVG IIGGENEADR LRNYQCLVDK LPAAIGVEKV
SLFPAADYDG VIQGLLGGTL DYAELGASGY AKIYLAKADA VEPILTTVQT DGSTGYHSIM
VARKDSGITK LEDLKGKKLG FADPDSTSGY LVPLVTLPEA IGAPVKEYFG ETGFGGGHEN
LVLEVVKGTF DAGTTFGSGV GEFKDGYTSG NLRKMVDKGI VDMNDLVELW KSPLIPNGPI
VVRTALNGDM KAKFKQFMID LPKTDAACFS AIQGGDFTGF VEVNSEFYKP IIDARKATIG
G
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