| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4660 |
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| Symbol | |
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| ID | 5319335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1171408 |
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| End bp | 1172592 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640776458 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001313390 |
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| Protein GI | 150376794 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.37515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00979921 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAGC GCCTCATCTG GCTCGCCGTT GGCTCCTTCA CCATGAGTAC GGTCGGCTTC
GTATTCTCGA GCCTTCTGCC CTCGATCGCC GCCGACACAC ACACGACCAT TCCTCGTGCG
GGGCACCTGA TCACCCTGTT CGCGCTCTCC TATGCCATCG GCGCGCCGCT GCTATCGGCG
TTGGCCGGCG CGGCGGACAG GCGTCGATTG CTGGTGGCTG CGATGCTTAC CTTCGTCGTC
GGCAACTGCA TCGCGGCAAC GAGCGTCTCC TTCGCGACGC TGCTGTTCGC ACAGATCGTG
ATGGGAATGG CGAGCGGCCT CTTTGCGGCC ACAGCGCAAG CGACGGCGGT TTCGCTGGCC
GGAGCGGAGC ACCGCGCGCT GGCGATTTCA ATCGTGGTGG GCGGCACCAC GTTCGCGGTG
GCGCTGGGCG CGCCTCTGGG CGCGCTGATC GCCGCCTTCT GGGGATGGCG CGGCACGTTC
GGGGCGATTG CTCTGCTTGG GCTCTCCTGC GCCGCCGTGC TCTGGCTGCG CCTGCCGCGG
GGCCTCAGCG GAACGAAGCT GACAATGTCC GAGCGCTTCG GCGCCATCGG CCGTCCGGGA
GTCGCTTCGT CGCTATCGGT GACATTTCTC TACCTCACCG GCGGCTTCAT GATCATCTCC
TATCTTGCAC CGCTGGCGAT CGATGGGGCT GGGCTTTCGC AGCTGGCGCT ACCTGGCCTG
CTGCTTGCCT TCGGTGTTGG CGCGGTGATC GGCAATCTCT CCAGCGGCTA TCTGGCCGAC
CGGCTCGGCG CCACGCGCGT GGTGACAGCT TCGCTGATCT CGGCGCTGGT GGTCTCGTTG
ATGATCGCCA CCGGCCTGCA CCTTCTCACG CGTGATCTCG CCGGCTTGCT GCTGATCGGC
ATCATGGTGC CATGGGGCAT TGTAGGTTGG GCCTTTCCGC CGGCCCAGGC GAGCCGTATC
GTCGGCTTCG CACCCGAGGT CGCGCATCTG ACCCTGTCGC TCAACGCCTC GGCGATCTAT
CTCGGCATCG CGACCGGCAC GGCGATCGGC GGACGCGTGC TCGAGAATAC GGCTGCAGCC
GATCTCGGCT TCTTCGCCGC GCTGTTTCCG GTGGCTTCGC TTGCGGTCCT TTATGCAGGG
CTGCGCTCCC ACCGGCGGCG CTTGGCCACT GTCGCGGCGG AATAG
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| Protein sequence | MDKRLIWLAV GSFTMSTVGF VFSSLLPSIA ADTHTTIPRA GHLITLFALS YAIGAPLLSA
LAGAADRRRL LVAAMLTFVV GNCIAATSVS FATLLFAQIV MGMASGLFAA TAQATAVSLA
GAEHRALAIS IVVGGTTFAV ALGAPLGALI AAFWGWRGTF GAIALLGLSC AAVLWLRLPR
GLSGTKLTMS ERFGAIGRPG VASSLSVTFL YLTGGFMIIS YLAPLAIDGA GLSQLALPGL
LLAFGVGAVI GNLSSGYLAD RLGATRVVTA SLISALVVSL MIATGLHLLT RDLAGLLLIG
IMVPWGIVGW AFPPAQASRI VGFAPEVAHL TLSLNASAIY LGIATGTAIG GRVLENTAAA
DLGFFAALFP VASLAVLYAG LRSHRRRLAT VAAE
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