| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4658 |
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| Symbol | |
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| ID | 5318821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1168408 |
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| End bp | 1169943 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640776456 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001313388 |
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| Protein GI | 150376792 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0234611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0199218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA TTCTCAGGCC CGGCTCGGTT CCGCTCAGCG ATCTGGAAAC GATATACTGG
ACTGGCGCGC CGGCGCGCCT CGACCCTGCC TTCGATGCTG GTGTGGCCAA GGCTGCAGCG
CGGATTGCCG AGATCGTCGC GGGCAATGCG CCCGTCTACG GCATCAATAC AGGTTTCGGC
AAACTGGCTT CGATCAAGAT CGACAGCGCC GACGTGGAAA CGTTGCAGCG CAATCTGATC
CTCTCCCATT GCTGCGGCGT CGGCCAGCCG CTCACGGAAA ACATCGTGCG GCTGATCATG
GCACTGAAGC TGATCTCTCT CGGCCGCGGC GCCTCCGGTG TGCGGCTCGA ACTCGTCCGG
CTCCTCGAAG CGATGCTGGA CAAGGGCGTG ATCCCGCTCA TCCCGGAGAA AGGCTCCGTA
GGCGCGTCCG GAGACCTCGC GCCGCTTGCG CACATGGCCG CGGTGATGAT GGGCCACGGC
GAGGCCTTCT ATGCCGGCGA ACGCATGGCG GGTGCAGCGG CGCTGCGGGC TGCGGGGCTT
TCTCCCGTCA CGCTTGCCGC CAAAGAGGGC CTCGCCTTGA TCAACGGCAC CCAGGTCTCG
ACGGCTCTCG CCCTTGCCGG GCTCTTCCGC GCCCACCGCG CCGGCCAGGC GGCACTTATC
ACCGGCGCCC TTTCGACCGA CGCGGCCATG GGCTCTTCCG CCCCCTTCCA TCCGGATATT
CATACGCTTC GCGGCCATAA AGGCCAGATC GACACGGCCG CCGCCTTACG GCACCTGCTG
ACTGGCTCCC CGATTCGCCA AAGCCATATC GAGGGCGACG AGCGCGTGCA GGATCCCTAT
TGCATCCGCT GCCAGCCACA GGTCGACGGC GCCTGCCTCG ACCTCCTGCG TTCCGTCGCA
GCCACCTTGA CGATCGAAGC CAACGCCGTC ACCGACAATC CGCTGGTGCT TTCGGACAAT
TCCGTCGTCT CGGGCGGCAA TTTCCATGCC GAACCGGTAG CCTTTGCCGC CGACCAGATC
GCGCTTGCGG TGTGCGAAAT CGGCGCCATT GCCCAGCGCC GCATCGCCCT TCTGGTCGAC
CCCGCGCTCA GCTACGGCCT GCCGGCTTTC CTCGCCAAGA AACCGGGTCT CAATTCCGGA
CTGATGATTG CGGAGGTCAC GTCGGCGGCG TTGATGTCGG AAAACAAGCA GCTCTCCCAT
CCAGCCTCCG TCGACTCGAC GCCCACGTCT GCAAATCAGG AAGACCACGT GTCCATGGCC
TGCCACGGTG CGCGCCGACT TCTGCAGATG ACGGACAACC TCTTTGCGAT CGTCGGCATC
GAGGCGCTCG CTGCGGTGCA GGGTATCGAG TTCCGCGCGC CGCTCACCAC CAGCCCGGAA
CTTCAGAAGG CCGCCGCTGC CGTGCGCAGC ATCTCGCCCA GCATCGAGGA AGATCGCTAC
ATGGCCGACG ACCTGAAGGC CGCGGCCTAT CTCGTGGCGT CGGGTCAGCT CGCCGCCGCC
GTCTCCGCCG GCATTCTTCC CAAACTGGAG AACTGA
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| Protein sequence | MTIILRPGSV PLSDLETIYW TGAPARLDPA FDAGVAKAAA RIAEIVAGNA PVYGINTGFG
KLASIKIDSA DVETLQRNLI LSHCCGVGQP LTENIVRLIM ALKLISLGRG ASGVRLELVR
LLEAMLDKGV IPLIPEKGSV GASGDLAPLA HMAAVMMGHG EAFYAGERMA GAAALRAAGL
SPVTLAAKEG LALINGTQVS TALALAGLFR AHRAGQAALI TGALSTDAAM GSSAPFHPDI
HTLRGHKGQI DTAAALRHLL TGSPIRQSHI EGDERVQDPY CIRCQPQVDG ACLDLLRSVA
ATLTIEANAV TDNPLVLSDN SVVSGGNFHA EPVAFAADQI ALAVCEIGAI AQRRIALLVD
PALSYGLPAF LAKKPGLNSG LMIAEVTSAA LMSENKQLSH PASVDSTPTS ANQEDHVSMA
CHGARRLLQM TDNLFAIVGI EALAAVQGIE FRAPLTTSPE LQKAAAAVRS ISPSIEEDRY
MADDLKAAAY LVASGQLAAA VSAGILPKLE N
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