Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4655 |
Symbol | |
ID | 5318818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1164633 |
End bp | 1165844 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776453 |
Product | major facilitator transporter |
Protein accession | YP_001313385 |
Protein GI | 150376789 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.347673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.129123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTCCT CGCTTCTGAT CGCCATGCGC AATCCGGTCA TCCGGACAAG CATGTTCGCC ATTGTCCTGT TCGGTTTTTC GGGCGCTGCT ACGTCGCCCT ACCAGTCAGT CGTCGGCATC ACTGAACTGG GCTTGAGTGA CGGGCTCTAT TCGGCACTGA TCTTCGCCGC GGCCCTGGTC AACGTCGCGC TAAGCGTGAC GATCGGCATT GTAGCCGATC GCGTCGGCAA TTACCGGACT TTGATGCTGG CGGTCATTCT CTGCGGCGTT GCGGGCTACG GGGCGGTCTA TCTGCTGCCA ACGAAATTGA GCTTCGTGCT TGCAGCACTC ATTTTGTTGC CGGCTTACGG AGCGCTCAAT CCTCTACTCT TCGCCTATGT CCGCACGGCT GCGAAGGACA TGGGAGGTAG GCATGCGGCT GCAGTCAATT CCGCCATTCG CGCTGCCATA TCGCTTTCCT GGGTACTGGT CCCGGGACTG GTCGGATTGG TTCTGTCGGC ACACGGCAGC ATGCTGCCGG CCTACCTGCT GGCAAGCCTC GGCTGTCTCG CCAACTTCGT GCTTGTTTTG CGGCGGCTGC CGCCCAAGGC GGCTGTCGAC CAAGCTTTGG GCAAGCGCCT CTCCTTTCTC GCGTCCTTCG GCGAGATATT GTCATTGCGC GTTGTGTTAA GGCTTCTCGC CATAGCCCTG ATCTCCTCGA CCCTGCACGT CAATGCGGCG GTGCTGCCAC TGATCGTTAC AGGTGCGGTC GGCGGCGACG TGGGCGACAT CGGCATTATC GTCGGCATCG TTGCGCTGCT GGAGGTGATT TTCATCCTGG TATGGGGACG TATCCAGGAC AGCCTCAGCC ATATCAACGC ACTCGCGCTC GGAACTGCGA TCTATGTGGT CAACATGGCC CTGCTGGGGC TCTCGGCCGA GCGCTGGCAC ATTTATGCGC TGACGCTCGT AAGCGCTTTC GGCGCAGCGG CGCTGATCAG CATTCCGATC ACATATCTGC AGGAACTGAT CGCAGACCGG CCCGGGCTCG GAAGCTCGCT AATTTCGGTG AATATATTCC TCGGCGCCGG CCTCGGCGCC GCTCTGTTCG CGCTCGGAAC GCGCATCAGC GACTATTCAG GAACAGCGCT TCTAAGCTCC CTCGCGGGCG TGGCCGGTCT CTCGCTGCTT CTTTTTCTGG ATGGCGGGCG AGGGAAAGCC TCTGCGCTCT GA
|
Protein sequence | MPSSLLIAMR NPVIRTSMFA IVLFGFSGAA TSPYQSVVGI TELGLSDGLY SALIFAAALV NVALSVTIGI VADRVGNYRT LMLAVILCGV AGYGAVYLLP TKLSFVLAAL ILLPAYGALN PLLFAYVRTA AKDMGGRHAA AVNSAIRAAI SLSWVLVPGL VGLVLSAHGS MLPAYLLASL GCLANFVLVL RRLPPKAAVD QALGKRLSFL ASFGEILSLR VVLRLLAIAL ISSTLHVNAA VLPLIVTGAV GGDVGDIGII VGIVALLEVI FILVWGRIQD SLSHINALAL GTAIYVVNMA LLGLSAERWH IYALTLVSAF GAAALISIPI TYLQELIADR PGLGSSLISV NIFLGAGLGA ALFALGTRIS DYSGTALLSS LAGVAGLSLL LFLDGGRGKA SAL
|
| |