Gene Smed_4655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4655 
Symbol 
ID5318818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1164633 
End bp1165844 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content60% 
IMG OID640776453 
Productmajor facilitator transporter 
Protein accessionYP_001313385 
Protein GI150376789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.347673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.129123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCT CGCTTCTGAT CGCCATGCGC AATCCGGTCA TCCGGACAAG CATGTTCGCC 
ATTGTCCTGT TCGGTTTTTC GGGCGCTGCT ACGTCGCCCT ACCAGTCAGT CGTCGGCATC
ACTGAACTGG GCTTGAGTGA CGGGCTCTAT TCGGCACTGA TCTTCGCCGC GGCCCTGGTC
AACGTCGCGC TAAGCGTGAC GATCGGCATT GTAGCCGATC GCGTCGGCAA TTACCGGACT
TTGATGCTGG CGGTCATTCT CTGCGGCGTT GCGGGCTACG GGGCGGTCTA TCTGCTGCCA
ACGAAATTGA GCTTCGTGCT TGCAGCACTC ATTTTGTTGC CGGCTTACGG AGCGCTCAAT
CCTCTACTCT TCGCCTATGT CCGCACGGCT GCGAAGGACA TGGGAGGTAG GCATGCGGCT
GCAGTCAATT CCGCCATTCG CGCTGCCATA TCGCTTTCCT GGGTACTGGT CCCGGGACTG
GTCGGATTGG TTCTGTCGGC ACACGGCAGC ATGCTGCCGG CCTACCTGCT GGCAAGCCTC
GGCTGTCTCG CCAACTTCGT GCTTGTTTTG CGGCGGCTGC CGCCCAAGGC GGCTGTCGAC
CAAGCTTTGG GCAAGCGCCT CTCCTTTCTC GCGTCCTTCG GCGAGATATT GTCATTGCGC
GTTGTGTTAA GGCTTCTCGC CATAGCCCTG ATCTCCTCGA CCCTGCACGT CAATGCGGCG
GTGCTGCCAC TGATCGTTAC AGGTGCGGTC GGCGGCGACG TGGGCGACAT CGGCATTATC
GTCGGCATCG TTGCGCTGCT GGAGGTGATT TTCATCCTGG TATGGGGACG TATCCAGGAC
AGCCTCAGCC ATATCAACGC ACTCGCGCTC GGAACTGCGA TCTATGTGGT CAACATGGCC
CTGCTGGGGC TCTCGGCCGA GCGCTGGCAC ATTTATGCGC TGACGCTCGT AAGCGCTTTC
GGCGCAGCGG CGCTGATCAG CATTCCGATC ACATATCTGC AGGAACTGAT CGCAGACCGG
CCCGGGCTCG GAAGCTCGCT AATTTCGGTG AATATATTCC TCGGCGCCGG CCTCGGCGCC
GCTCTGTTCG CGCTCGGAAC GCGCATCAGC GACTATTCAG GAACAGCGCT TCTAAGCTCC
CTCGCGGGCG TGGCCGGTCT CTCGCTGCTT CTTTTTCTGG ATGGCGGGCG AGGGAAAGCC
TCTGCGCTCT GA
 
Protein sequence
MPSSLLIAMR NPVIRTSMFA IVLFGFSGAA TSPYQSVVGI TELGLSDGLY SALIFAAALV 
NVALSVTIGI VADRVGNYRT LMLAVILCGV AGYGAVYLLP TKLSFVLAAL ILLPAYGALN
PLLFAYVRTA AKDMGGRHAA AVNSAIRAAI SLSWVLVPGL VGLVLSAHGS MLPAYLLASL
GCLANFVLVL RRLPPKAAVD QALGKRLSFL ASFGEILSLR VVLRLLAIAL ISSTLHVNAA
VLPLIVTGAV GGDVGDIGII VGIVALLEVI FILVWGRIQD SLSHINALAL GTAIYVVNMA
LLGLSAERWH IYALTLVSAF GAAALISIPI TYLQELIADR PGLGSSLISV NIFLGAGLGA
ALFALGTRIS DYSGTALLSS LAGVAGLSLL LFLDGGRGKA SAL