| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4653 |
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| Symbol | |
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| ID | 5318816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1161201 |
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| End bp | 1163120 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776451 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_001313383 |
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| Protein GI | 150376787 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.292919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0791763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGG CCGCTTATCG CCTTGAATCT GCCTGGCAAC CGGATGGTGG CCCATTCGGG
CGCTTCACCT TCAGCCTCTT TAACCTTTCG GGCGAGCCGC TTAGCGACTT TCGGCTCGTC
TACACGTCGC TCACCCGCGT CATCGATCCG GACGCATGCG AGAATGCGGT CTTCCTCCGC
AGGAATGCCA ATTTCCACGA GTTCGCGCCG CCCGAAGGAC TGACGCTTGC CCACGGAGAG
CACTGGACAT TCATGATCAG CGGTCTGCAC CGGCAGGCGA AGCATTGCAC CGACGGGGCG
AAGTCGGCCT ATCTGACGCT CGCCGATGGA AGTCATGTCG CTGTGGCGGT TTCCGACCTT
CGTCTGGAGG GCGCCGTAAG CGAGCCGCCG CCGGAGCGCC TCCCCGAAGG CTGGCTCGAC
CTTCCTTTCG CGCTGCAGCC CTGGCCCGCG GAGATCGATG CAGCGCCCGG AGACCTGCTT
CCGGATTTCC TCTATCCTGC GGCGGGAAGC GCTGCGGACG AGATCGAGGC GGTCTCCAAC
GTACTCGCGC TCTTCCACAG GCTGTTTTCG GCGGGTCACG CTCCATTCAG CCTTGCGCCT
TCCTCCCAGG GGCGGCCGAT CATGTTCAAA AAGGCAGCCG AGCTCGGCGG AGAAGCCTAC
AGGCTTCATT TTTCCGACGA GGAGATCCGG CTCGACTATG GAGCTGCCGC CGGGAGGCAA
TACGGCCTGA CGTCCCTCGC CCAACTGATC GACGGTGCCC GCAACCACGC CGGGAGTTTC
AGTTTTCCGG TATCCGGTGT AATCGCGGAC GGGCCGCGCT ACGGGTGGCG CGGCTGTCAT
CTCGATGTGT CGCGGCAATT CTATCCGACC GCCGACATTC TGCGCCTCAT TGATATCCTC
GCCTGGTTCA AGCTCAACAT CTTCCATTGG CACTTGACCG ATGACGAAGC CTGGCGGCTT
GAAATCAAGG CCTATCCGAC GCTCACGACC CTGGGCGTCA TGCGGGGGCC GGACGAGCCG
ATGCTGCCTC AGCTCGGCAA CGGCGCCGAA CCGGTCGGCG GCTTCTACAG CCAGGAGGAA
GCAAAGGCGA TCGTCGCGCA TGCTGCGGCG CTCAGCATCG AAGTCGTTCC GGAGATCGAC
ATTCCCGGAC ACAGCACTGC CGCGCTCGTG GCGATTGCCG AACTCTCCGA TGGACAGGAG
GCGCCGGAAA GCTACCATTC GGTCCAGGGC TATCCCAACA ACGCCCTTAA CCCTGCCATT
CCGCTCACCT ACGAATTCCT CGAGAAGGTG TTCGACGAAA TGGTCGAGCT CTTCCCGAGC
CGATATATCC ATGTCGGCGG TGACGAGGTG GCAGACGGTT CGTGGCTCGC TTCGCCGCTG
GCGCGAAAGC TTATGGAACA GGAAGGCATT TCCGGCACCT TCGCACTGCA GTCCTATTTC
CTAAAGAAAG TGAAACAGAT GCTGACGGCG CGAGGCCGCA AGCTTGTCGG CTGGAACGAG
GTTGCCCATG GCGGCGGGGT CGGAACAAAG GACACGCTGC TGATGGCTTG GGAGAACCCC
AAGGTTGGGA TCGAGCTGGC ACGCGAGGGT TACGACGTCG TGATGACGCC CGGCCAGGCC
TATTATCTCG ACATGGCCCA GGCGGATGCC TGGCAGGAAC CCGGTGCCAG CTGGGCCGGC
ACGGCAACGC CGTCGCACAC CTACGCCTAT GAGGCGGAAG GGGAGTTCCC GAAAGAGCTG
AAGAGCCGCA TGAAGGGCGT CCAGGCCTGC ATCTGGTCCG AGCATTTCCT CTCGCGGGGA
TATTTCAACC GCCTCGTCTT TCCCAGGCTG CCGGCAATTG CCGAGGCGGC CTGGACGCCG
AAGGACAAGA AGGATTGGTT GCGCTTTGCC GCGATCGCGC CATTGAGTCC CGTTCTGTGA
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| Protein sequence | MLQAAYRLES AWQPDGGPFG RFTFSLFNLS GEPLSDFRLV YTSLTRVIDP DACENAVFLR
RNANFHEFAP PEGLTLAHGE HWTFMISGLH RQAKHCTDGA KSAYLTLADG SHVAVAVSDL
RLEGAVSEPP PERLPEGWLD LPFALQPWPA EIDAAPGDLL PDFLYPAAGS AADEIEAVSN
VLALFHRLFS AGHAPFSLAP SSQGRPIMFK KAAELGGEAY RLHFSDEEIR LDYGAAAGRQ
YGLTSLAQLI DGARNHAGSF SFPVSGVIAD GPRYGWRGCH LDVSRQFYPT ADILRLIDIL
AWFKLNIFHW HLTDDEAWRL EIKAYPTLTT LGVMRGPDEP MLPQLGNGAE PVGGFYSQEE
AKAIVAHAAA LSIEVVPEID IPGHSTAALV AIAELSDGQE APESYHSVQG YPNNALNPAI
PLTYEFLEKV FDEMVELFPS RYIHVGGDEV ADGSWLASPL ARKLMEQEGI SGTFALQSYF
LKKVKQMLTA RGRKLVGWNE VAHGGGVGTK DTLLMAWENP KVGIELAREG YDVVMTPGQA
YYLDMAQADA WQEPGASWAG TATPSHTYAY EAEGEFPKEL KSRMKGVQAC IWSEHFLSRG
YFNRLVFPRL PAIAEAAWTP KDKKDWLRFA AIAPLSPVL
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