| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4652 |
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| Symbol | |
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| ID | 5318815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1160382 |
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| End bp | 1161176 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640776450 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001313382 |
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| Protein GI | 150376786 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.109281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0540489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCACAAG GAACGCCTAT TCCGAAGTCC GTAGCGATCG TCACGGGAGC CGCCGGCGAC
ATCGGCCGTG CTATTGCCCG GCGCCTGCGT GACGGACATG ATACCGTCCT GTTAGCCGAC
ATCGAGGGCG AGGCGGCCGA GAGAACGGCG CGTGATCTCG GCGGAGCGGA GCGGTTCGTG
GCCGTCACCT GCGACGTGAC GGACACCGCA AGCGTATCCG CAATGGCTCG GGCAGCCGCC
TCCTTCGGAA CCGTGCGTAC ACTCGTGAAC AATGCGGGCG CTGCGCGCGC CGTCAGCCTG
CACGACACGA CGCAGGATAC ATGGCGCGCG GACAATGCGC TCAACCTCGA AGCGGCCTTT
CTCTGTTTCA GGGCTGTCGA GGAAATGCTG AAGGAGAGCC GGGGTGCGGT CGTCAACATC
GCCTCGGTAA ACGGGATGAA CGTTTTCGGC CATCCCGCCT ACAGCGCCGC CAAGGCTGGC
CTTTTGCACC TGACCCGGCT GATCGCCGTC GAATACGGCA AGTTCGGCAT CCGCGCGAAT
GCGGTCGCGC CGGCGACGGT GCGCACGCGG GCCTGGGAGG CGCGCGCAGC CGCCAATCCC
GATGTCTTCG AAGAGGCGAA GCGCTGGTAC CCCCTGCAGC GCATCGTCGA TCCGCAGGAC
GTCGCCGAGG CCGTCCATTT CCTTGCCAGT CCCGCCGCCG GAGCCATCTC CGGCATCTGC
CTGCCGGTCG ACTGCGGGCT TACCGCGGGC CATGCCGAAG TCGCCCGGAC CTTCACGCAA
TCGATCCACT ACTGA
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| Protein sequence | MPQGTPIPKS VAIVTGAAGD IGRAIARRLR DGHDTVLLAD IEGEAAERTA RDLGGAERFV
AVTCDVTDTA SVSAMARAAA SFGTVRTLVN NAGAARAVSL HDTTQDTWRA DNALNLEAAF
LCFRAVEEML KESRGAVVNI ASVNGMNVFG HPAYSAAKAG LLHLTRLIAV EYGKFGIRAN
AVAPATVRTR AWEARAAANP DVFEEAKRWY PLQRIVDPQD VAEAVHFLAS PAAGAISGIC
LPVDCGLTAG HAEVARTFTQ SIHY
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