| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4651 |
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| Symbol | |
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| ID | 5318814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1159517 |
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| End bp | 1160380 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776449 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001313381 |
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| Protein GI | 150376785 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0360971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0554389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT TCGCGACACT GCAGGAAGAG AAAGGGCGGC TCTCTCAATC GGAGAACCGC
ATTGCCGATA TCCTGCTCAA CGATTTCGAG TTTGCTGTTA ACGCTTCCAT CATCGAGCTC
GCCGGAAAAG CCGACGTTTC GCCACCGACG GTGACCCGCT TCTGCAGGCG ACTTGGCTGC
GAGAGCTTTT CCGATTTCAA GGTTCAACTG GCGCGTACAC CCTATGTCGG GATGCGCTAC
CTGAAGCCGG AGCCCAAGAG CCAGGAGCCC GGCGATGTGG CCCAGGACAT CATCACCAAG
GCGCAGAATG CATTGCTCCT CTTACATCGG TCGCTCGACC TTGCAGCCAT AGAGCGCGCG
GCCGACCAGT TGGCGCAAGC GGAAATGATC TATGCCTTCG GTTCCGGCGG GAACTCCTCG
ATGATCGCCG GGGAGTTCCA GAACCGTCTC TTCCGCCTCG GCATGCGCAT CACTTCGAGC
TCCGACCACA GCATGCAAAT GATGATGGCG GCGGCCGCAC GTCCGGCCGA TGTCATTGTT
GGATCGTCTT TCTCGGGTCG GAATGCGGAA CTGGTGCGAG CCTTCATCCT TGCGCGCGAG
GCCAAGGTGC CGACGATCGC GCTAACCCAG AGCGGCAGCC CCGTGGCGCA GGCCGCCGAC
ATCACCGTGC CGGTCGACCT GCCGGAAGGA AACAACATCT ATCGCCCCAC CTCCACCCGC
ATCGCCTATC TCGCTTTGCT CGATATCGTC GCGAGTCTTG TCGCCTATCG CGTCCAGCCG
CAGGCAACCG TGACCCTCAG GCGCATCAAG CAGCAGCTCG TGGTGCACAG GGATGGCGAC
GACCGGCAGC TTATGGGAGA CTGA
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| Protein sequence | MDIFATLQEE KGRLSQSENR IADILLNDFE FAVNASIIEL AGKADVSPPT VTRFCRRLGC
ESFSDFKVQL ARTPYVGMRY LKPEPKSQEP GDVAQDIITK AQNALLLLHR SLDLAAIERA
ADQLAQAEMI YAFGSGGNSS MIAGEFQNRL FRLGMRITSS SDHSMQMMMA AAARPADVIV
GSSFSGRNAE LVRAFILARE AKVPTIALTQ SGSPVAQAAD ITVPVDLPEG NNIYRPTSTR
IAYLALLDIV ASLVAYRVQP QATVTLRRIK QQLVVHRDGD DRQLMGD
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