| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4645 |
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| Symbol | |
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| ID | 5319290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1154796 |
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| End bp | 1155929 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776443 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313375 |
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| Protein GI | 150376779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.396966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0568321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGACAGC TCACTCTCAA CAAGGTTCAG AAATCCTACG GCACCTACGA GGTGTTGAAG
AGCATCGAGC TCGAAGTCGG AAATGGCGAA TTCGTGGTCT TCGTCGGACC TTCCGGCTGC
GGCAAATCAA CACTGCTCAG GATGATCGCG GGGCTTGACG AGACGACCGC GGGTGACATC
GTCATCGATG GCAAGCGTGT TAACGATCTG CCGCCCGTCA GGCGCGGCAT AGCCATGGTC
TTCCAGTCCT ATGCTCTATA CCCGCATATG AGCGTGTTCG AGAACATCGC CTTTCCTCTA
CGGGTCGAGA AGATGCCCGA GGAGAAACTG AAGGCGAAGG TTCAGCATGC CGCCCGCATA
TTGCACCTCG ATCAGCGGCT CGAGCAGAAG CCGGGCATGC TGTCGGGCGG GCAGCGTCAA
CGTGTGGCGA TCGGCCGGGC AATCGTGCGC GAACCGAAGA TCTTCCTGTT CGACGAGCCG
CTGTCTAACC TCGATGCTGC CTTGCGCGCC GATATGCGCA TTGAGCTCGC GAAGCTGCAC
AGGCATTTGA AGGCGACGAT GATCTACGTC ACGCACGACC AGGTCGAGGC GATGACGATG
GCGGACCGGA TTGTCGTGCT GAACGCCGGA GAGATTGCGC AGACGGGAGC GCCGCTCGAG
CTTTATCACA AACCCGCAAA CATATTCGTC GCAGGATTTA TCGGAAACCC CAAGATGAAC
TTTCTGCCGG TCACCTGTAC AGGTGTAAAC GATGCCGGTG TGGAAGTGGA CTACAAGGGA
CAGACGATTC TCGTTCCGGT CGTACCGCGC GCGGGCATGA CCGGGCGAAC CCTGACGCTC
GGGGTGCGGC CGGAACATAT CCGGATGGGC GACGCCGACC TGACGCTGAC GGTGACCCCC
TCGGTCATCG AGCGTCTCGG CGCCCATACA GTGGCCTATG TGGCGCTTGA CGGGGAAGGG
GAGAACTATT GCGCCATGCT GCCGGGGACA CTCGCGATCC GCGCCGACCA ACGGGTCAAG
ACCGGCATCG GTGCCATCGA CTGCCACCTC TTCGACGAAA AGGGGATGGC CTTCGAGCGG
CGGGTAGAGA TGACCGACAT CGATATGTCG CACTTCGATC CGGCGGCGGC TTGA
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| Protein sequence | MGQLTLNKVQ KSYGTYEVLK SIELEVGNGE FVVFVGPSGC GKSTLLRMIA GLDETTAGDI
VIDGKRVNDL PPVRRGIAMV FQSYALYPHM SVFENIAFPL RVEKMPEEKL KAKVQHAARI
LHLDQRLEQK PGMLSGGQRQ RVAIGRAIVR EPKIFLFDEP LSNLDAALRA DMRIELAKLH
RHLKATMIYV THDQVEAMTM ADRIVVLNAG EIAQTGAPLE LYHKPANIFV AGFIGNPKMN
FLPVTCTGVN DAGVEVDYKG QTILVPVVPR AGMTGRTLTL GVRPEHIRMG DADLTLTVTP
SVIERLGAHT VAYVALDGEG ENYCAMLPGT LAIRADQRVK TGIGAIDCHL FDEKGMAFER
RVEMTDIDMS HFDPAAA
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