| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4638 |
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| Symbol | |
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| ID | 5319283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1147533 |
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| End bp | 1148732 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776436 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001313368 |
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| Protein GI | 150376772 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.508179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.272859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATTG GTATAATCCA GGAAAAAGAA CGCTTGGCAT TCCGTTTCGA CAAACTCGGG
GTCATCATCT CGATACTCGC CCTTTATGGC GCGCTCCTTG CCCCTTTCGC GACATATCGC
GCAAACAGAA TCATTCAGGG CGAAGCGCGG GGTATAATGG AAGCTCTTCC TCCACACCTC
GGCTACGGGC TCCTCTTCCT CGTGGTCGCC GGCGCTGCAG TCGCGCTTCT GAGGACGCCG
GCCCTTTTCC GGATGGCCAT GGCGCTCGCT GCACTGGCGG CTCTCGCCGG TCTGATCGGA
ATTGCGGCAG ATCATCTGAC GCCGCCGGAG AATAGCTATG CACGGGTGTC CCCCGCATCC
GGCTTCTGGG TTCTGGTTTT CGCATTCTCG CTGCTGCTCA CCGATGCCCT GACTCGCCTT
AATCCAGGAC CCGGTCTGCG CCTTCTCGTA CTGGCGGGCG TTCTCGTTCT TGCAGGGTCA
ATGCTCGTCG CCGGCCGCTG GGACGGGCTT TCGATCATGA AGGAATATGC CAATCGGGCC
GATTTGTTCT GGGCCGAGGC TGGCCGCCAC GTGACGCTGG CGCTCGGCTC GCTGGCCGCC
GCCACCGTCG TCGGTTTGCC TCTAGGCATT CTGTGCCACC GGGTCGAACG GCTGCGGGCG
GGCGTGCTCA ACGTCCTGAA CGCCATCCAG ACGATCCCAT CCATTGCGCT TTTTGGTATT
TTGATCGCGC CGCTCGGCTG GATCGCCGCA AATATTCCCG GCGCTTCGGC GGTCGGCATT
CGCGGCATCG GTGCGGCCCC CGCCTTCGTC GCACTTTTCC TCTATTCTCT GCTTCCGGTC
GTTGCCAACA CAGTGGTGGG GCTCGCGGGT GTGCCGCGCG CAGCCAACGA CGCGGCCCGA
GGTATCGGCA TGACGGATCG GCAGCGCCTT GTTACGATCG AGTTCCCGTT GGCCTTTCCG
GTCATCCTGA CCGGCATTCG TATCGTGCTC GTGCAGAATA TCGGGCTCGC CACGATCGCC
GCTCTTATCG GCGGAGGCGG CTTCGGCGTC TTCGTCTTCC AAGGGGTCGG TCAGACGGCG
ATGGATCTGG TGCTGCTGGG CGCCATCCCG ACGGTCGTGC TGGCCTTCAC CGCGGCGATC
GTACTGGACG CATTGATCGA AATGACCGTG CCAAATAGCA GTCAGGGCAA TGCCGCATGA
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| Protein sequence | MAIGIIQEKE RLAFRFDKLG VIISILALYG ALLAPFATYR ANRIIQGEAR GIMEALPPHL
GYGLLFLVVA GAAVALLRTP ALFRMAMALA ALAALAGLIG IAADHLTPPE NSYARVSPAS
GFWVLVFAFS LLLTDALTRL NPGPGLRLLV LAGVLVLAGS MLVAGRWDGL SIMKEYANRA
DLFWAEAGRH VTLALGSLAA ATVVGLPLGI LCHRVERLRA GVLNVLNAIQ TIPSIALFGI
LIAPLGWIAA NIPGASAVGI RGIGAAPAFV ALFLYSLLPV VANTVVGLAG VPRAANDAAR
GIGMTDRQRL VTIEFPLAFP VILTGIRIVL VQNIGLATIA ALIGGGGFGV FVFQGVGQTA
MDLVLLGAIP TVVLAFTAAI VLDALIEMTV PNSSQGNAA
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