Gene Smed_4636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4636 
Symbol 
ID5319271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1144923 
End bp1146299 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content61% 
IMG OID640776434 
Productmercuric reductase 
Protein accessionYP_001313366 
Protein GI150376770 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.295825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC ACTTCGATGC AATCATCATA GGTGCCGGCC AGGCGGGGCC GTCCCTCGCC 
GGACGGTTGA CCGACGCCGG CAAGACTGTC GCGCTCATCG AGCGCAAGCT CTTCGGAGGC
ACCTGCGTCA ATACGGGCTG CATGCCGACA AAAGCCATGG TCGCAAGCGC CTATGCGATC
CATACGGCCC GCCGCGGTGC CGAATACGGG ATGACGACAG GGCCCGTTTC GGTCGATTTC
GGCCGCGTCA TGGCGCGAAA GGAAAAGGTG CGGCTCGATG CCCGTTCCGG CCTGCAAAAA
TGGCTCAGGG GTATGACGAA CTGCACCCTC TTCGAGGGCC ACGCCCGTTT CGGCGGTCCG
CGGGAGATCC GCATCGGCGA GGAGCTGATT TCGGGAGAGC AGATCTTTAT CAATGTGGGC
GGCCGCGCCG CCGTTCCGGC TCTGCCCGGC GTTAACGGCA TTCCCTATCT GACCAACAGC
TCCATCATGG ACCTCGCCGA ACTGCCGGAA CATCTCGTCA TCGTGGGAGG CAGCTATATC
GGGCTCGAAT TCGCCCAGAT GTTCCGCCGC TTCGGCTCCG ATGTTACCGT TATAGAGAAG
GGGCCGCGTC TGATCGGGCG GGAGGATCCG GAAGTTTCCG ATGCAATCCG CGAGATCCTC
GAGAACGAAG GCATTCGGAT ACGCACGAAT GCGGAATGCA TCCGCTTCTC GCAAACAGCG
GCCGGCATCG CCGTCGGCGT CGATTGCACC TCGGGCGAGC CGGAGGTGAC CGGTTCCCAT
GTGCTGCTTG CGACCGGCCG CCACCCGAAT ACGGATGACC TGGGCTTGGA AAAGGCTGGT
GTAAAAACCG ATGCACGGGG CTATATCGAG GTCGACGACA GCCTGCGCAC GAATATTCCG
CACATTTTCG CGATGGGCGA TTGCAATGGC CGAGGCGCAT TTACGCACAC GTCCTACAAC
GATTTCGAGA TCGTCGCCGC CAATCTCCTC GATGACGATC CGCGCCGCGT GAGCGACCGC
ATCCAGACCT ATGCACTGTA TATCGACCCA CCGCTGGGTC GCGCCGGTAT GACGGAAACC
GAAGCGCGCA AAAAAGGATG CAAGCTCCTT ATCGGGACCC GGCCGATGAC CCGGGTCGGC
CGCGCGGTCG AAAAGGGCGA AACGCAGGGC TTCATGAAAG TGATCGTCGA TGCGGACACC
AAGGATATTC TGGGTGCCTC GATTCTCGGG ACGGGTGGGG ACGAAGCGAT ACAGAGCATC
CTCGACGTGA TGTATGCGAA GAGGCCATAT ACGACGATCA GCCGCGCCGT GCACATACAC
CCGACCGTAT CGGAACTCAT CCCGACGGTT TTCGGGGATC TTTCGCCGGC GGACTGA
 
Protein sequence
MNKHFDAIII GAGQAGPSLA GRLTDAGKTV ALIERKLFGG TCVNTGCMPT KAMVASAYAI 
HTARRGAEYG MTTGPVSVDF GRVMARKEKV RLDARSGLQK WLRGMTNCTL FEGHARFGGP
REIRIGEELI SGEQIFINVG GRAAVPALPG VNGIPYLTNS SIMDLAELPE HLVIVGGSYI
GLEFAQMFRR FGSDVTVIEK GPRLIGREDP EVSDAIREIL ENEGIRIRTN AECIRFSQTA
AGIAVGVDCT SGEPEVTGSH VLLATGRHPN TDDLGLEKAG VKTDARGYIE VDDSLRTNIP
HIFAMGDCNG RGAFTHTSYN DFEIVAANLL DDDPRRVSDR IQTYALYIDP PLGRAGMTET
EARKKGCKLL IGTRPMTRVG RAVEKGETQG FMKVIVDADT KDILGASILG TGGDEAIQSI
LDVMYAKRPY TTISRAVHIH PTVSELIPTV FGDLSPAD