Gene Smed_4633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4633 
Symbol 
ID5319268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1143097 
End bp1143552 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content60% 
IMG OID640776431 
ProductRbsD or FucU transport 
Protein accessionYP_001313363 
Protein GI150376767 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.457707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA ATATCGACCC GGCTCTGAAT GCCGATGTGC TGCATGCGTT GCGCTCTATG 
GGGCATGGTG ACACGCTTGT GATTTCCGAT ACCAATTTCC CGTCGGATGC CATCGCACGA
CAGACCACGC TCGGCAAATT GCTGCATATC GACAATGTTT CGGCGGCGCG CGCGGCGAAG
GCTATCCTTT CGGTGCTTCC CCTCGATACG CCGCTGCAGC CTTCGGCCGG GCGCATGGAG
GTCATGGGCG CACCCGACGA GGTCCCGGGC GTGCAACGCG AGGTGCAGGC CGAAATCGAT
CGCGCCGAGG GGAAGCCCGC GCCGATGTAC GGCATCGAGC GTTTTGCCTT CTATGAGGAA
GCGAAGAAGG CCTATTGCGT CATCACCACC GGCGAGACAC GGTTTTACGG CTGCTTTCTT
TTTACCAAAG GCGTCGTTCC GCCAGAAACC ATCTGA
 
Protein sequence
MLKNIDPALN ADVLHALRSM GHGDTLVISD TNFPSDAIAR QTTLGKLLHI DNVSAARAAK 
AILSVLPLDT PLQPSAGRME VMGAPDEVPG VQREVQAEID RAEGKPAPMY GIERFAFYEE
AKKAYCVITT GETRFYGCFL FTKGVVPPET I