Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4626 |
Symbol | |
ID | 5319261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1129627 |
End bp | 1130106 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776425 |
Product | heat shock protein Hsp20 |
Protein accession | YP_001313357 |
Protein GI | 150376761 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.34011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAA GCTTCGATTT CTCGCCGCTG TCGCGCTCCA GCGTTGGCTT CGAACATCTG TTCGACCTCT TGGATTCCGC AAGCCGCCTG GCACCTGGCG ACAATTGGCC GCCCTACGAC ATCTTGCGTG TCGGTGAGAA CCAGTACCGG ATCGCAATGT CGGTAGCGGG CTTCGCCCCG GACGAGATCA CCATCACGCA CGAGCAGCAG ATGCTGACCA TCACCGGTGC GAAAGCCGGG GAAGACGACA CCGAATACCT CTATCGCGGC ATTGCCGCAC GCAGCTTCGA GCGTCGATTC CAGCTCGCCG ACTTCGTCAC CGTAACCGGC GCGAACCTCG CCAACGGCAT GCTCAAGATT GATCTCGTTC GTGAGCTTCC AGAGCAGATG AAGCCGCGTC GAATCGAGAT ACAGCAGGCA GAAGCACTGC CGGGCGGCGA ATCCTCGAAA CAGATAGAAG GCGAAAAGCA CGCAGCGTAG
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Protein sequence | MRTSFDFSPL SRSSVGFEHL FDLLDSASRL APGDNWPPYD ILRVGENQYR IAMSVAGFAP DEITITHEQQ MLTITGAKAG EDDTEYLYRG IAARSFERRF QLADFVTVTG ANLANGMLKI DLVRELPEQM KPRRIEIQQA EALPGGESSK QIEGEKHAA
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