Gene Smed_4626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4626 
Symbol 
ID5319261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1129627 
End bp1130106 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID640776425 
Productheat shock protein Hsp20 
Protein accessionYP_001313357 
Protein GI150376761 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.34011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAA GCTTCGATTT CTCGCCGCTG TCGCGCTCCA GCGTTGGCTT CGAACATCTG 
TTCGACCTCT TGGATTCCGC AAGCCGCCTG GCACCTGGCG ACAATTGGCC GCCCTACGAC
ATCTTGCGTG TCGGTGAGAA CCAGTACCGG ATCGCAATGT CGGTAGCGGG CTTCGCCCCG
GACGAGATCA CCATCACGCA CGAGCAGCAG ATGCTGACCA TCACCGGTGC GAAAGCCGGG
GAAGACGACA CCGAATACCT CTATCGCGGC ATTGCCGCAC GCAGCTTCGA GCGTCGATTC
CAGCTCGCCG ACTTCGTCAC CGTAACCGGC GCGAACCTCG CCAACGGCAT GCTCAAGATT
GATCTCGTTC GTGAGCTTCC AGAGCAGATG AAGCCGCGTC GAATCGAGAT ACAGCAGGCA
GAAGCACTGC CGGGCGGCGA ATCCTCGAAA CAGATAGAAG GCGAAAAGCA CGCAGCGTAG
 
Protein sequence
MRTSFDFSPL SRSSVGFEHL FDLLDSASRL APGDNWPPYD ILRVGENQYR IAMSVAGFAP 
DEITITHEQQ MLTITGAKAG EDDTEYLYRG IAARSFERRF QLADFVTVTG ANLANGMLKI
DLVRELPEQM KPRRIEIQQA EALPGGESSK QIEGEKHAA