| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4620 |
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| Symbol | |
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| ID | 5318931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1120864 |
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| End bp | 1122345 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776419 |
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| Product | xanthine dehydrogenase small subunit |
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| Protein accession | YP_001313351 |
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| Protein GI | 150376755 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
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| TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.678377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.546493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG AATTCCGAAA TACGATCCGT TTCCTTTTGA ATGACCGGTC CGTCGAGCTT
GCCGACGTCT CGCCGGTGCA GACGCTGCTG GACTTCCTGC GTATCGACCG CAATCTGCGC
GGCACGAAAG AAGGCTGCGC GGAAGGCGAT TGCGGTGCCT GCACCGTACT TGTCGGCCGC
CTCCTCGACG GCAAGCTCCG ATACGAATCG GTGAATGCGT GCATCCGCTT CGTCGCATCG
CTTGACGGCT GTCATGTGGT GACGGTTGAA GCGCTTGCCC AGCCGAACGG GCCGTTGCAT
CCGGTACAGC AGGCGATGGT AGACACGCAC GCCTCGCAAT GCGGTTTCTG CACACCCGGT
TTCGTGATGT CCCTCTACGG TCTCTGGATG GCCAACGCGA AGCCGAGCAT TCAGCAGATC
GAGAAGGCGT TGCAGGGCAA TCTCTGTCGT TGTACCGGCT ATGCGGCGAT CATTCGGGCG
GCCGAAGCGA TCGCATCGGT GGGTGAGCTC GGCAAGGACC CGCTGATTGT GGAACGCGAG
CAAATCACGC GACAACTGAA GGCCCTTCAA GACGGTCGCC GAGTGGAGAT CGGGGGCGAA
GACGAGCGCG TCGTGCTGCC GGCCTCGCTG GACGATTTCG CTGCGGTTCT CCAGGCCAAC
CCCAAGGCGA CGATCGTCGC CGGTTCGACC GATGTCGGGC TCTGGGTTAC CAAGTTCATG
CGCAACATCG CGCCGGTCGT GCACCTCTCG CATCTGGAAG AGTTGCGGCG GATCTCGGTC
GGGGTGGATG GGATCACCCT TGCTGCCGGC GTAAGCTACA CGGAGGCCTA CCCGGCCATC
GTCAGGCACT TCCCGCAACT GCGCGAACTC TGGGACCGTA TCGGCGGCGA ACAGGTACGC
AATATGGGCA CAGTCGGCGG CAACATCGCT AACGGTTCTC CGATCGGCGA CACGCCGCCT
GCGCTGATCG CATTGGGCGC TTCGGTCACC CTGCGCAAGG GAACAAACCG CCGTACGCTG
CCGCTCGAAG CCTTTTTCCT CGAATACGGC AAACAGGATC GCGAATCCGG CGAATTCGTC
GAGTCTGTCC GGATTCCCTT CCTGGACGAG ACGCACCGCT TCGCCGTCTA CAAGATCTCG
AAGCGATTCG ATGAAGACAT TTCCGCAGTC TGCGGCGCCT TCCGCGTGAA GCTCGACGGA
GACGGCAGGG TTGCCGATGT GGCTATCGCC TTTGGCGGCA TGGCCGGCAC GCCGAAGCGC
GCCCGGAATG TGGAAGCCGC TCTCAAGGGC GCGCAATGGA ACGACGCTGC CGTCGAAGCT
GGCGTCGCCG CCTTCGAGCG CGATTTCGCG CCGCTCACCG ACTGGCGTGC CTCTTCTGAA
TATCGGATGC TCGTTGCCAG GAATCTCCTC CGGCGCTTCC ATCTGGAAAC GCAGGAGACG
CGCCATGTCC GGATCGACCG CACGGTCGCG GTGGCTATGT AG
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| Protein sequence | MTIEFRNTIR FLLNDRSVEL ADVSPVQTLL DFLRIDRNLR GTKEGCAEGD CGACTVLVGR
LLDGKLRYES VNACIRFVAS LDGCHVVTVE ALAQPNGPLH PVQQAMVDTH ASQCGFCTPG
FVMSLYGLWM ANAKPSIQQI EKALQGNLCR CTGYAAIIRA AEAIASVGEL GKDPLIVERE
QITRQLKALQ DGRRVEIGGE DERVVLPASL DDFAAVLQAN PKATIVAGST DVGLWVTKFM
RNIAPVVHLS HLEELRRISV GVDGITLAAG VSYTEAYPAI VRHFPQLREL WDRIGGEQVR
NMGTVGGNIA NGSPIGDTPP ALIALGASVT LRKGTNRRTL PLEAFFLEYG KQDRESGEFV
ESVRIPFLDE THRFAVYKIS KRFDEDISAV CGAFRVKLDG DGRVADVAIA FGGMAGTPKR
ARNVEAALKG AQWNDAAVEA GVAAFERDFA PLTDWRASSE YRMLVARNLL RRFHLETQET
RHVRIDRTVA VAM
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