Gene Smed_4619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4619 
Symbol 
ID5318930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1120487 
End bp1120858 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID640776418 
Producthydroxyisourate hydrolase 
Protein accessionYP_001313350 
Protein GI150376754 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.437716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTC AAGACGGAAC GTCCGGCCGC TTGACGACCC ACGTGCTGGA CACGTCGAGC 
GGCAAACCGG CAAGCAATCT GCGCATCGAT CTCTACCGGA TTGAAGGTGA ACGGACAGAG
CTTCTCTCGT CGACACGAAC CAATGACGAC GGGCGATGCG ATGCGCCGCT TCTCAACGGC
TCCACGATGG AAACCGGAAC TTACGAACTG CGCTTTCACG CCGGCGAATA TCTCGGCCCC
GGGGCGGAGC GCGAGGTGAA CCCGTTTCTC GATGTCATCC CGATCCGCTT CGGCATCGCC
GACCGGGCTG CGCACTATCA CGTGCCGCTT CTGCTTTCGC CTTACGGCTA TTCCACCTAT
CGCGGGAGCT GA
 
Protein sequence
MQVQDGTSGR LTTHVLDTSS GKPASNLRID LYRIEGERTE LLSSTRTNDD GRCDAPLLNG 
STMETGTYEL RFHAGEYLGP GAEREVNPFL DVIPIRFGIA DRAAHYHVPL LLSPYGYSTY
RGS