Gene Smed_4614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4614 
Symbol 
ID5318381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1115185 
End bp1115652 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content62% 
IMG OID640776414 
Producthypothetical protein 
Protein accessionYP_001313346 
Protein GI150376750 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.857535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.64967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTT CCCGCAGAGA ATTCCTGACC GCTCTGATGG GCTTTGTTGC GTTGACGACC 
GGCACGCGTT GGGCAATTGC AGGCAAGGGC CACATGCGGA TCTACAAAGA CCCGTTGTGC
GGCTGCTGCG AGAGCTGGGC CGAGGCGATG AGGCGAGCGG CTTACGCAGT CGAAGTGCAC
AACGAAGCAG ACATGGCGGC GATCAAGCGC CGCTTCGCCG TTCCGGCGGA TCTGGAGGCC
TGTCATACTG CAGTCATCGA GGGCTACGTC ATAGAAGGCC ATGTGCCGCC CGAAGCCATC
GGGAAGCTTA TGGACGAGCG GCCTGCGATT GCAGGGCTTG CGGTCCCGGG CATGCCAGAG
GGCTCCATCG GCATGGGAGA CAGCCCGAAC GCTTCCTATG ATGTCTATGC CTTCGGCAAG
TCCGAAGCGA CGCCGAGGCT GTTCTATCAG GTCCGTCCGC GTGCCTAG
 
Protein sequence
MPLSRREFLT ALMGFVALTT GTRWAIAGKG HMRIYKDPLC GCCESWAEAM RRAAYAVEVH 
NEADMAAIKR RFAVPADLEA CHTAVIEGYV IEGHVPPEAI GKLMDERPAI AGLAVPGMPE
GSIGMGDSPN ASYDVYAFGK SEATPRLFYQ VRPRA