| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4598 |
|---|
| Symbol | |
|---|
| ID | 5318508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 1098063 |
|---|
| End bp | 1099217 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640776399 |
|---|
| Product | glycosyltransferase family 28 protein |
|---|
| Protein accession | YP_001313331 |
|---|
| Protein GI | 150376735 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4671] Predicted glycosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.312674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.707093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCAGCC CCCGCGTCCT TTTCTATGTC CAGCACCTTC TCGGTATAGG GCATCTGGCG
CGCGCCAGCC GTATAGCCGA AGCCCTCATC AGGCGGGATT TCGACGTCAC GATGGTGACG
GGCGGTACGC CGGTACCGGG CTTCCCGGGG GATGGCGTGA AGACCATCGC TCTGCCGCCG
GTGACGGCAG GCGACAAGGG CTTTTCGGGG CTCGTCGACG GCGAGGGCCG CGCGGTCACG
GCGGCTTTCC AGGAACATCG CCGGGATCTG CTGCTCGAGA TCTACCGCCG TGTGGTGCCT
GAAGTCGTCA TCATAGAGGC CTTCCCCTTC GGGCGCCGGC AGATGCGGTT CGAGCTGCTG
CCGCTGCTCG CCGAGATTGC CGCGAGTGAC CGGCCGCCGC TCGTCGCGAC GTCGCTGCGC
GACATTCTGC AGGAGAGGCT CAAACCCGGG AGAGCCGAGG AAACCGTCGA AATCGTCAAG
AACCATTTCG ACCTCGTACT CGTGCATGGC GATCCCGGAT TCGCGCGCAT CGAGGAGACG
TTTCCCCTTG CGGGCGAAAT CAGCGGCAAG GTGGTATACA CCGGCCTCGT AGCGCCGCCG
CGGCCGACTG GAGTGCCCGA GAAATTTGAC GTCGTTGTTT CGGCGGGTGG AGGAGCCGTC
GGCAGCGCGC TGATTGGCGC GGCACTTGCG GCTGCCAAGC TTTTGCCGAA CGCACTTCGC
TGGTGCCTTG TGACCGGCCC GAACCTGCCG CAGGCGGATT TCGACGCATT CGCGGCTGCG
GCACCGCCGG GCGTAAGCCT CTTTCGGTTC CGGCGGGATT TCGGGGGCCT GCTTGCCGGT
GCCCGCCTTT CCATCTCTCA AGCGGGCTAC AACACAGTGT GCGACATTTT GCGTGCCGGG
TGCGCTTGCC TGCTCGTTCC CTTTACCGCG GGCGGCGAAA CCGAACAGCG TATGCGGGCC
GCACGGCTTG AAGAGCTGGA CCTTGCCGGC GTTCTGCCGG AGGAGGGGAT CACGCCCGAG
CTGCTGGCCG CGAAGGTCGG CGCGATGCTT GCCCGCCCGA AACCGGCCAT CCCGCCGCTG
GACCTCGACG GAGCCGCCGG AACGGCGAGG ACCATCGAAG AGCGGCTTCC GGGCAGGCGG
TCTTCAAAGG TTTAG
|
|---|
| Protein sequence | MSSPRVLFYV QHLLGIGHLA RASRIAEALI RRDFDVTMVT GGTPVPGFPG DGVKTIALPP
VTAGDKGFSG LVDGEGRAVT AAFQEHRRDL LLEIYRRVVP EVVIIEAFPF GRRQMRFELL
PLLAEIAASD RPPLVATSLR DILQERLKPG RAEETVEIVK NHFDLVLVHG DPGFARIEET
FPLAGEISGK VVYTGLVAPP RPTGVPEKFD VVVSAGGGAV GSALIGAALA AAKLLPNALR
WCLVTGPNLP QADFDAFAAA APPGVSLFRF RRDFGGLLAG ARLSISQAGY NTVCDILRAG
CACLLVPFTA GGETEQRMRA ARLEELDLAG VLPEEGITPE LLAAKVGAML ARPKPAIPPL
DLDGAAGTAR TIEERLPGRR SSKV
|
|---|
| |