| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4593 |
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| Symbol | |
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| ID | 5319009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1091446 |
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| End bp | 1093347 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776394 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313326 |
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| Protein GI | 150376730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.996188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCC GCAGAACCGC GCTCGGCCTT CTCGCAACGG CGGCCTTTCC TAAAACCTTG
CTTGCGGCTG CAGGCGGGGC CGACCCGCTC GCTGCCCTCG TTCAGGAGGG CAAACTTCCC
CCGGTCGGCG AAAGGCTGCC GAAGACGCCG CGGGTGATCA ATGTCGCGGG GATGGGCCGC
AAAGCCGGGC GGCACGGCGG CACCATCCGC AGCCTGATCG GCAGTGCGAA GGACATTCGC
CTGATGACGA TCTATGGCTA TGCACGCCTG GTCGGGTACG ACGAGGAACT GAACCTACAG
CCTGACGTTC TCGAAAGCTA CGAAACGGTC GAGGACCGGA TTTTCACCTT CCACCTGCGC
GAGGGCCATA GGTGGTCCGA TGGCACGCCG CTGACCGCCG AGGACTTCCG TTACTGCTTC
GAAGACGTTC TGCTCAACGA GGACCTTTCC CCGGCAGGCC TGCCGACCTC GATGGTGATG
GATGGTCAAG CGCCCAAGCT CGAAATCGTC GACGAACGGA CGGTCCGCTA TTCCTGGCCG
ATGCCAAATC CGGTCTTCCT GCAGGAACTC GCCGCGCCGC AGCCGCTGAT CGTGGCGATG
CCTTCGGCCT ATCTCAAGCA GTTCCACAAA AAATATCAGG AAGAGGACAA GCTGAAGACC
TTACTGAAAG AACAGCGGGT CAAGAGGTGG AGCCAGCTCC ACATGCGCAT GGCACGGTCC
TACCGGCCGG AGAACCCGGA CCTGCCCACC CTCGACCCCT GGCGCAACAC GACGCCGTTG
CCTGCCGAAC AGTTCGTCTT CGAGCGCAAT CCCTATTACC ACCGGGTGGA CGAAAACGGC
CTGCAGCTGC CTTACATCGA CCGGTTCGTT CTCAGCGTGA GCTCGTCCGC GCTTATCCCG
GCAAAGACCG GCACGGGCGA GAGCGACCTG CAGGCAAATG GGATCGATTT CGTCGACTAT
ACCTATCTTA AGGATGCGGA GAAGCGGTAT CCGGTCGAGG TGAAGCTCTG GAAGAAGACC
TCGGGATCGC GCCTGGCATT GCTGCCGAAC CTCAACTGTG CCGACCCGGT GTGGCGGGCG
TTGCTAAGAG ACGTGCGCGT CCGTCGGGCT CTGTCGCTCG CAATCGACCG GCGCGAGATC
AACATGGCCG CCTTCTACGG GCTGACGAAG GAGAGCGCCG ATACTGTGCT GCCGGAAAGC
CCTCTCTTCC GTCCCGAATT CGCAAGTGCC TGGATCGCAC ATGACCCGGA GCAGGCGAAC
ACCCTGCTCG ACGCCGCAGG GCTGGCCAAA CGCGGCAGCG ACGGGATCCG TATTCTTCCC
GACGGCCGGA AGGCGCAGAT CGTCGTCGAG ACGGCCGGCG AGAGCACACT CGATACGGAC
GTGCTGCAGC TGATCACCGA CTATTGGCGT GAAGTCGGCA TTTCGCTCTT CATCCGTACC
TCTCAGCGCG ATACCTTCCG CAGCCGTGCG GTGGGGGGCG AGATCATCAT GTCGATATGG
TTCGGTATCG ACAACGGCGT GCCGACGGCT GACATGAGTC CTCACCAGCT CGCGCCGACA
GCGGACGACC AGCTGCAATG GCCCGTCTGG GGCTTGAACT ATATCTCCCA CGGCGAAATG
GGAGAAACGC CAGACCTTCC GGCCGTGGTC GAACTTCTGG AGCTGCTGAA GCGCTGGAGG
CATTCGGCCG ACGATGCGGA GCGGGCGGAC ATCTGGAGAA AGATGCTGTC CATCTATACG
GACCAGGTCT TCTCGATCGG GCTGGTCAAC AGTTCCCTGC AGCCTATCCT CGTGACCAAG
AAGCTGCGCA ATTTCCCGGA AGAGGGCCTT TGGGGTTTCG ACCCGACGAG CTATTTCGGC
GCCTACAAGC CCGACACCTT CTGGCTGGAA CAGGACGGCT GA
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| Protein sequence | MITRRTALGL LATAAFPKTL LAAAGGADPL AALVQEGKLP PVGERLPKTP RVINVAGMGR
KAGRHGGTIR SLIGSAKDIR LMTIYGYARL VGYDEELNLQ PDVLESYETV EDRIFTFHLR
EGHRWSDGTP LTAEDFRYCF EDVLLNEDLS PAGLPTSMVM DGQAPKLEIV DERTVRYSWP
MPNPVFLQEL AAPQPLIVAM PSAYLKQFHK KYQEEDKLKT LLKEQRVKRW SQLHMRMARS
YRPENPDLPT LDPWRNTTPL PAEQFVFERN PYYHRVDENG LQLPYIDRFV LSVSSSALIP
AKTGTGESDL QANGIDFVDY TYLKDAEKRY PVEVKLWKKT SGSRLALLPN LNCADPVWRA
LLRDVRVRRA LSLAIDRREI NMAAFYGLTK ESADTVLPES PLFRPEFASA WIAHDPEQAN
TLLDAAGLAK RGSDGIRILP DGRKAQIVVE TAGESTLDTD VLQLITDYWR EVGISLFIRT
SQRDTFRSRA VGGEIIMSIW FGIDNGVPTA DMSPHQLAPT ADDQLQWPVW GLNYISHGEM
GETPDLPAVV ELLELLKRWR HSADDAERAD IWRKMLSIYT DQVFSIGLVN SSLQPILVTK
KLRNFPEEGL WGFDPTSYFG AYKPDTFWLE QDG
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