Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4583 |
Symbol | |
ID | 5318999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1077445 |
End bp | 1078635 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776384 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001313316 |
Protein GI | 150376720 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA ATTCGAACTC CCCGGCTGTC GTGGCTGGAA ACATGTCCGG GGCCCGTGTG ACGATTATCC TGCCGAGCCT TGGGGCCGGC GGCACCGAAC ATGTGGTAAA GCTGGTCGCC AACCATTGGG CCCAGCTCGG TTGCAAGGTG ACGCTGATCA CGCTCGAACT GCCTCATGCC AGACCTTATT ACGAATTCGA TCCGAGGATC GCGATCGAAC GTCTCGGTTT GCCGCCGCAG CAAGGCGGGA AGATTCGGGC GGGCCTGCTC GTGCTCAGGA GAATCTACCG CCTGCGCTCT GCAATTCGCC ACTCGCAGCC CGATTTCGTC TTGAGCTTCC TGACCCGGAC CAATGTACTG ACGCTTCTTG CAACGATCGG ACTGCCGGTG CCTGTGGTCG TTTCCGAGCG CAATAATCCG GCGCTGCAGC CTTTCGGTGT GTTCTGGAAA TGGATTCAGC GCCGTTTGTA TCCGCGCGCA TTCGGGCTCG TGACTATGAC GAGGGGCGCT CTCGACTATT TTCCGGAGAA GATGCGCAGC CGAGGGTGGG TTATCGCCAA TGCCGTCGAT CTCCCCGGCG AATGGCAGAA GAGACGCGGC AACAATATCC TGACCGCCGT CGGCCGGCTG ACGCGACAGA AAGGCTTCGA TCTCCTGATC GAGGCCTTTG CGAGGATTGC CTCGAGGCAC CCCGAATGGA AGCTCGTCAT CTGGGGCGAG GGCGACGACA GGAAGTCGCT CGAGGCCCTG CGGGATGCGT TGGATATGAC CGACAGGGTG GAGATGCCGG GCGTGACGCA AAGGCCCGGA GTGTGGGTTG AGACGGCTGA CGTATTCGTA TTGTCGTCGC GCTACGAGGG ATGGGGCATC GTTCTGCTCG AGGCCATGGC TGCAGGGCTT CCCGTGGTTT CCTTTGCATG CGAGTGGGGC CCCTCGGACA TGGTGGAGCA TGGGGAGGAT GGACTTCTCG TTCCCAGCAA TGACGTGGAT GCTCTTGCCG AGGCGCTCTC CAGGGTCCTT GCCGACGGCG AGCTCAGAAG CCGTCTGGCT GCAAATGCAG AGGCGAGCGC CAAGAGATAC TTGCCGGATC GCATACTTTC GCAATGGGAC GCAGTCGCCT TATCGGCCTT GAAACATACG GCTCGCGACC ATGCCGCAAC GGCTTCGGTC GTCGGAGCCG GCTCGGCTTG A
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Protein sequence | MSENSNSPAV VAGNMSGARV TIILPSLGAG GTEHVVKLVA NHWAQLGCKV TLITLELPHA RPYYEFDPRI AIERLGLPPQ QGGKIRAGLL VLRRIYRLRS AIRHSQPDFV LSFLTRTNVL TLLATIGLPV PVVVSERNNP ALQPFGVFWK WIQRRLYPRA FGLVTMTRGA LDYFPEKMRS RGWVIANAVD LPGEWQKRRG NNILTAVGRL TRQKGFDLLI EAFARIASRH PEWKLVIWGE GDDRKSLEAL RDALDMTDRV EMPGVTQRPG VWVETADVFV LSSRYEGWGI VLLEAMAAGL PVVSFACEWG PSDMVEHGED GLLVPSNDVD ALAEALSRVL ADGELRSRLA ANAEASAKRY LPDRILSQWD AVALSALKHT ARDHAATASV VGAGSA
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