Gene Smed_4572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4572 
Symbol 
ID5318019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1062364 
End bp1063977 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content58% 
IMG OID640776373 
Producthypothetical protein 
Protein accessionYP_001313305 
Protein GI150376709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACCTC TACGAAAGCT GTGGGCATGT CTGCCGCGGC AAAGGGCGGT TCTGGCGTGC 
CTTTGCGACG GTTCAGCATT CGAGAATCCT GTACAGGCCG TTTCTTTCGG CAGACCATCA
GTTTCAGCTT TGACTCGGCG GCACGAGAGA ATGACGGCAA TCAATAAGTC GCAGGACGTA
AGGGCACTTG GTTTCACGAT AGCTCACTGC CTGATATTGG GAGGGGTGCT CTGCGGATCA
TGGCTCGCCT TTCCAGCGAA AACGGCCGCT CAGACCACGT TAGCCGAGCC TCTTCCACCT
AAGCTTCCGG ACGGCAGGCA ACGCGCCTTC CCCACGGCTG AAGGCTTCGG TGCCGGCTCT
CTCGGCGGGC GAGGGGGCAA AGTGCTCTAT GTCGTCAACA CCGACGAGTC AGGCCCGGGT
TCGCTGCGCG CGTGCATCGA AGCCTCAGGA CCGCGCGTCT GTGTCTTCCG AACGGGCGGC
ACCATCGTTC TGCGCGAGAG GTCCTTGGTC GTTCGAAATC CATTTCTGAC GATAGCCGGA
GAGACCGCGC CAGGTGGTGG CATCGCGATC CGCAACGGCG ACAAGCAAAT TCGCCCTTCA
ATCGAGATCG TGACAAACGA CGTGATCATC AGGCACATTC GCCTTCGCCC AGGCCCACAT
GCCGTTAGGG CCTGTTGTTC GGGCGGGCTT GGAATGTATT CCGCGGCCGC CAAGGACATC
ATGCTTGATC ATATCTCGGC CAGTTGGGGT TCTGACGAGA CTGTCGATTC GGAAGATGCG
AGCAATTTTA CCTGGCAGTG GGGAATTGCG AGCGAACCGC TGCTGCGGGG CGGACCGGGA
AAAAAGAACC GTGCACGCAA CATGCTGTTT ACGAAGGGTG GAAACATCTC CGTCCACCAC
TCGCTCTTTG CTTTTGGCCA GTTCAGGAAT CCGTTGATAA AGATGAAGAT TCCCGGAGCA
GTAGCCGACG TCGTGAACAA TGTTTTTTTC TCGCCAAAGT GGCAATACGT CCTCAGTTTC
GGCGATGAAT GGGGCCATAT TCGTGCCAAC GTGGTCGGCA ACTACAAGAT CGCTGGAGAG
AACCTTCAAA ACGACCATAT GGTCCATCTC TTCGATGAGC GCGGTGGCGG CCATGCGATC
TATGTGAAGG ACAACTACGA CGAACCCTAT CGCACGCAGC CCGGGCAGGA TGACAGCTTG
GTTCTGGCGG AAAGCCAAAG AGGGTCTGTT TCGCCACAGG CGTTCAACGC AGAGGCAGTC
CGAGCTTCCG GGCCTGAAAT TGCTTACGAC GAAGTCCTGG CACACGCCGG TGCCACAAAG
CCGCAACGGG ACGCCATCGA TCGCCGCATC GTCGAGGACG TCAAGAACCG CCGTGGGCGG
TTGCTCGCGA ACGATCCCAA CGACGTTGGC GGTTGGCCGG AGCTCGATGC CGGTATTCCA
TATCAGGACA GCGACATGGA CGGCATTTCA GATGACTGGG AGGTTGCCAA CGGCACCGAC
CCGAAAAATG CCGACGACGC GAAATCCGAC CAGGATGGTG ACGGTTGGAC CAACCTCGAG
AGCTTCCTCC ACTTCATGGC CGGCGATACC GCTGACGCTG CCAGCCACGA GTGA
 
Protein sequence
MIPLRKLWAC LPRQRAVLAC LCDGSAFENP VQAVSFGRPS VSALTRRHER MTAINKSQDV 
RALGFTIAHC LILGGVLCGS WLAFPAKTAA QTTLAEPLPP KLPDGRQRAF PTAEGFGAGS
LGGRGGKVLY VVNTDESGPG SLRACIEASG PRVCVFRTGG TIVLRERSLV VRNPFLTIAG
ETAPGGGIAI RNGDKQIRPS IEIVTNDVII RHIRLRPGPH AVRACCSGGL GMYSAAAKDI
MLDHISASWG SDETVDSEDA SNFTWQWGIA SEPLLRGGPG KKNRARNMLF TKGGNISVHH
SLFAFGQFRN PLIKMKIPGA VADVVNNVFF SPKWQYVLSF GDEWGHIRAN VVGNYKIAGE
NLQNDHMVHL FDERGGGHAI YVKDNYDEPY RTQPGQDDSL VLAESQRGSV SPQAFNAEAV
RASGPEIAYD EVLAHAGATK PQRDAIDRRI VEDVKNRRGR LLANDPNDVG GWPELDAGIP
YQDSDMDGIS DDWEVANGTD PKNADDAKSD QDGDGWTNLE SFLHFMAGDT ADAASHE