Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4572 |
Symbol | |
ID | 5318019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1062364 |
End bp | 1063977 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640776373 |
Product | hypothetical protein |
Protein accession | YP_001313305 |
Protein GI | 150376709 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATACCTC TACGAAAGCT GTGGGCATGT CTGCCGCGGC AAAGGGCGGT TCTGGCGTGC CTTTGCGACG GTTCAGCATT CGAGAATCCT GTACAGGCCG TTTCTTTCGG CAGACCATCA GTTTCAGCTT TGACTCGGCG GCACGAGAGA ATGACGGCAA TCAATAAGTC GCAGGACGTA AGGGCACTTG GTTTCACGAT AGCTCACTGC CTGATATTGG GAGGGGTGCT CTGCGGATCA TGGCTCGCCT TTCCAGCGAA AACGGCCGCT CAGACCACGT TAGCCGAGCC TCTTCCACCT AAGCTTCCGG ACGGCAGGCA ACGCGCCTTC CCCACGGCTG AAGGCTTCGG TGCCGGCTCT CTCGGCGGGC GAGGGGGCAA AGTGCTCTAT GTCGTCAACA CCGACGAGTC AGGCCCGGGT TCGCTGCGCG CGTGCATCGA AGCCTCAGGA CCGCGCGTCT GTGTCTTCCG AACGGGCGGC ACCATCGTTC TGCGCGAGAG GTCCTTGGTC GTTCGAAATC CATTTCTGAC GATAGCCGGA GAGACCGCGC CAGGTGGTGG CATCGCGATC CGCAACGGCG ACAAGCAAAT TCGCCCTTCA ATCGAGATCG TGACAAACGA CGTGATCATC AGGCACATTC GCCTTCGCCC AGGCCCACAT GCCGTTAGGG CCTGTTGTTC GGGCGGGCTT GGAATGTATT CCGCGGCCGC CAAGGACATC ATGCTTGATC ATATCTCGGC CAGTTGGGGT TCTGACGAGA CTGTCGATTC GGAAGATGCG AGCAATTTTA CCTGGCAGTG GGGAATTGCG AGCGAACCGC TGCTGCGGGG CGGACCGGGA AAAAAGAACC GTGCACGCAA CATGCTGTTT ACGAAGGGTG GAAACATCTC CGTCCACCAC TCGCTCTTTG CTTTTGGCCA GTTCAGGAAT CCGTTGATAA AGATGAAGAT TCCCGGAGCA GTAGCCGACG TCGTGAACAA TGTTTTTTTC TCGCCAAAGT GGCAATACGT CCTCAGTTTC GGCGATGAAT GGGGCCATAT TCGTGCCAAC GTGGTCGGCA ACTACAAGAT CGCTGGAGAG AACCTTCAAA ACGACCATAT GGTCCATCTC TTCGATGAGC GCGGTGGCGG CCATGCGATC TATGTGAAGG ACAACTACGA CGAACCCTAT CGCACGCAGC CCGGGCAGGA TGACAGCTTG GTTCTGGCGG AAAGCCAAAG AGGGTCTGTT TCGCCACAGG CGTTCAACGC AGAGGCAGTC CGAGCTTCCG GGCCTGAAAT TGCTTACGAC GAAGTCCTGG CACACGCCGG TGCCACAAAG CCGCAACGGG ACGCCATCGA TCGCCGCATC GTCGAGGACG TCAAGAACCG CCGTGGGCGG TTGCTCGCGA ACGATCCCAA CGACGTTGGC GGTTGGCCGG AGCTCGATGC CGGTATTCCA TATCAGGACA GCGACATGGA CGGCATTTCA GATGACTGGG AGGTTGCCAA CGGCACCGAC CCGAAAAATG CCGACGACGC GAAATCCGAC CAGGATGGTG ACGGTTGGAC CAACCTCGAG AGCTTCCTCC ACTTCATGGC CGGCGATACC GCTGACGCTG CCAGCCACGA GTGA
|
Protein sequence | MIPLRKLWAC LPRQRAVLAC LCDGSAFENP VQAVSFGRPS VSALTRRHER MTAINKSQDV RALGFTIAHC LILGGVLCGS WLAFPAKTAA QTTLAEPLPP KLPDGRQRAF PTAEGFGAGS LGGRGGKVLY VVNTDESGPG SLRACIEASG PRVCVFRTGG TIVLRERSLV VRNPFLTIAG ETAPGGGIAI RNGDKQIRPS IEIVTNDVII RHIRLRPGPH AVRACCSGGL GMYSAAAKDI MLDHISASWG SDETVDSEDA SNFTWQWGIA SEPLLRGGPG KKNRARNMLF TKGGNISVHH SLFAFGQFRN PLIKMKIPGA VADVVNNVFF SPKWQYVLSF GDEWGHIRAN VVGNYKIAGE NLQNDHMVHL FDERGGGHAI YVKDNYDEPY RTQPGQDDSL VLAESQRGSV SPQAFNAEAV RASGPEIAYD EVLAHAGATK PQRDAIDRRI VEDVKNRRGR LLANDPNDVG GWPELDAGIP YQDSDMDGIS DDWEVANGTD PKNADDAKSD QDGDGWTNLE SFLHFMAGDT ADAASHE
|
| |