Gene Smed_4569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4569 
Symbol 
ID5319237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1059069 
End bp1059983 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content61% 
IMG OID640776370 
Productformyl transferase domain-containing protein 
Protein accessionYP_001313302 
Protein GI150376706 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG TCTTTGTAGG CGCCGTCGAA AGCTCCAAAA TCGCCTTGGA GGCACTCATA 
AAGGCGGGGC GCCCTCCGGC GCTTGTGATA ACGCTTCCGC CCGAAGCGGC GGGACGTCAT
TCTGATTTTG TGGACCTCGG AAACCTCGCA CTGGCAGCCG GAAGCGCGGT CCACCATTCG
ACCGATATCA ATGCTCCGGA GACGCTGGAG GCCGTTACAG CAGTCGCCCC GGATCTCACG
CTCGTCATAG GCTGGTCGCA GGTCTGCCGG CGTCCATTTC GCGAGATCGC GCGTGTGGGC
ACCGCCGGCT TTCATCCGGC GGCATTGCCG CGTCTGCGCG GCCGCGGGGT CATTCCCTGG
ACTATACTCC GCGGCGAAGA GAAAACCGGC TCGACCCTCT TCTGGCTGGA CGACGGCGTC
GATTCGGGAC CTATCCTCTT GCAGCGGCAA TTTCCGGTCG ATCCCGACGA AACCGCCCGC
AGCCTTTATA CCAAGCACAC TGAAAACCTG GCTCAGATGA TCGTGGAGGC CGCGGCACAG
GTCGAAGCCG GAAATGCCGC CCGCGCTGAA CAGAACCAGG CGGAGGCGAG CTATTGCGCA
AAACGCACCG CGGAAGATGG CTTGATTGAT TGGCGTCAGT CCGCCGCCTC TATATTGCGC
CTGATCCGCG CAGTCGGAGC CCCTTATCCG GGTGCCTTCA CATTCTACAA CGGGCAGAAA
ATTCGGATCG ATGCCGCGGT CCCCGTTGAG AATTCCAGCC GGTTCATTGG TTTGACAGGT
CAGATTCAAG CCATTACCGA GCGCGGCTTC ATCGTGCTTT GCGGAGATGC GGAATGTATC
GAAGCGACAT CCTGGAAATG GGCGTCGGAA CGACGACCGC CAATTCATGG CAAGCTCGGC
GGGACGGCCG CATAG
 
Protein sequence
MRIVFVGAVE SSKIALEALI KAGRPPALVI TLPPEAAGRH SDFVDLGNLA LAAGSAVHHS 
TDINAPETLE AVTAVAPDLT LVIGWSQVCR RPFREIARVG TAGFHPAALP RLRGRGVIPW
TILRGEEKTG STLFWLDDGV DSGPILLQRQ FPVDPDETAR SLYTKHTENL AQMIVEAAAQ
VEAGNAARAE QNQAEASYCA KRTAEDGLID WRQSAASILR LIRAVGAPYP GAFTFYNGQK
IRIDAAVPVE NSSRFIGLTG QIQAITERGF IVLCGDAECI EATSWKWASE RRPPIHGKLG
GTAA