| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4565 |
|---|
| Symbol | |
|---|
| ID | 5319233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1052572 |
|---|
| End bp | 1053735 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640776366 |
|---|
| Product | hemolysin-type calcium-binding region |
|---|
| Protein accession | YP_001313298 |
|---|
| Protein GI | 150376702 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.520328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.522149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTAA AGGGAACCAA TCTGTCGGAT ACGATCAACG GCGCTCTGGG CAACGATGAG
CTCTGGGGCT ATGCCGGCGA CGATCATCTC GACGGCGGCG ATGGCAACGA CAAGATTTTT
GGCGGCGATG GTAACGACTT CATCGTCGGC GGCCTCGGCG ACGACTATGC AGAAGGTGGG
GCGGGCAACG ACCGCTTCAA CGGCGGCCTT GGGCACGATA CGTTGAAGGG TGGATTAGGA
AACGACATCT TCGACGGGGG CGACGGCAGC GACGTTCTCG ATGGCGGCGA TGGCCATGAT
CAGATCCTGG GCGGCAGGGG ACATGACAAG ATCTTCGGCG GCGCGGGCGA AGAATACATC
GACGCAGGCG ACGGCGACGA TATCATTTAT GCCGGCTCCG GAGACGATGG CTTCAACAAC
CGGGTAAACC CCGCCACGGG ACAGGTCACG CAGCAGGCGG TCAGCGGGGG CGCCGGCCAC
GACAAGATCT ATGGCGAAGA TGGCAACGAC GCTCTCAAGG GCCAGTCCGG AAACGACTGG
GTTTATGGCG GCATCGGCAA CGACATCGTC GACGGCGGCG ACGGGAACAA CTATCTCGAC
GGCGGCGAAG GCAACGACGT GCTGGATTCC GAGGGGGGCA TCGACGAGGC GCACGGCGGT
AGCGGCAATG ACAAGGTTGT TGTTGGAGCC GGCGACGATC GGGTCTTCGG AGAAGACGGC
GATGACATGC TGTACGGAGA AGCCGGCAAC GATACTTTGA GCGGCGGCAA CAACTACGAC
CGCATTTTCG GCGGCGACGG GAACGACACC TTGCGCGGCG ACGCCGGACA GGACGTCCTC
GTCGGCGAGG CAGGAAGCGA CATTCTCTGG GGCGGAACGG AATCCGACCG TTTTGTCTTC
AAAGGGGCCG TAGCGCTCAG CGGCCAGGAT ACCGTGATGG ACTTCCAGGA TGGAGTCGAT
TTTCTCGTCA TCGAGAAGCT CGGGATCAAG CAATACTCCA GTTCAGGCGC CGCGGGCACC
GTCTACGCCT ATGATGCCAC CGGCGGCGAC GTGCTGGTAA AAGGCTATGA CGCCGCCGGC
ACGGCATTCT CCATTCTGGT GGACGATCCC AACGGCACCC TTAGTGCCGC AAACTTTTCG
AGCAGCGATT TCCTTTTCGC CTGA
|
|---|
| Protein sequence | MILKGTNLSD TINGALGNDE LWGYAGDDHL DGGDGNDKIF GGDGNDFIVG GLGDDYAEGG
AGNDRFNGGL GHDTLKGGLG NDIFDGGDGS DVLDGGDGHD QILGGRGHDK IFGGAGEEYI
DAGDGDDIIY AGSGDDGFNN RVNPATGQVT QQAVSGGAGH DKIYGEDGND ALKGQSGNDW
VYGGIGNDIV DGGDGNNYLD GGEGNDVLDS EGGIDEAHGG SGNDKVVVGA GDDRVFGEDG
DDMLYGEAGN DTLSGGNNYD RIFGGDGNDT LRGDAGQDVL VGEAGSDILW GGTESDRFVF
KGAVALSGQD TVMDFQDGVD FLVIEKLGIK QYSSSGAAGT VYAYDATGGD VLVKGYDAAG
TAFSILVDDP NGTLSAANFS SSDFLFA
|
|---|
| |