Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4560 |
Symbol | |
ID | 5318422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1047056 |
End bp | 1048957 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776361 |
Product | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein |
Protein accession | YP_001313293 |
Protein GI | 150376697 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0529] Adenylylsulfate kinase and related kinases [COG2895] GTPases - Sulfate adenylate transferase subunit 1 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00455] adenylylsulfate kinase (apsK) [TIGR02034] sulfate adenylyltransferase, large subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATATG TTCAATCCAT ACCGCCGCAT GACATTGAAG CGCATCTGGT TGAGCACGAC AACAAGTCGA TCCTGCGATT CATCACATGC GGTTCGGTCG ACGATGGCAA ATCCACTTTG ATCGGCCGGC TGCTCTACGA TGCGAAACTG ATCTTCGAGG ACCAGCTCGC AAACCTCGGA CGTGTCGGCT CTCCCGGTGC TGCCAATGGC AAGGAAATCG ATCTCGCTTT GCTTCTCGAC GGGCTCGAGG CCGAGCGCGA ACAGGGGATC ACCATCGACG TCGCCTACCG CTATTTCGCG ACGTCGAAGC GCAAGTTTAT CGTTGCCGAC ACGCCCGGTC ACGAAGAATA TACGCGCAAC ATGGTGACCG GCGCTTCGAC GGCGGATCTT GCCATCATCC TTATCGACAG CCGGCAGGGC ATTCTTCAGC AGACGCGGCG GCATTCCTAT ATCGCCTCGC TTCTGGGCAT TCGCCATGTC GTGCTGGCAG TCAACAAGAT CGATCTCGTA GACTTTCGAC AGCAGGTCTA TGACGAAATC GTCGCCGACT ACATGGCTTT TGCGAAAGAG CTCGGTTTTG CCAGCATTCG GCCGATACCG ATCTCAGCAC GAGACGGCGA CAACGTCATT TCGGCTTCAC CCAATACACC TTGGTACAGA GGGGCGGCGC TGCTCGAATA TCTGGAAACG GTAGAGCTCG AGCCCATGGA CCAGGCCAAG CCTTTCCGTT TCCCGGTTCA GATGGTGATG CGGCCAAATG CTGATTTCCG CGGCTATGCG GGTCAGATCT CCTGCGGCAG AATTTCCGTC GGCGATCCGG TCGTCGTCGC AAAAACCGGA CAGCGGACCT CGGTCAAGGC GATCGTGACC TATGACGGGG ACCTTGCGAC GGCAGGCGAG GGCGAGGCCG TAACGCTCGT CCTTTCCGAC GAGGTGGATG CTTCGCGCGG CAATATGCTC GTCGCCCCCG GCGCCCGGCC GTTCGTGGCG GATCAGTTCC AGGCGCATGT GATCTGGTTC GATGCGAGCC CGATGATGCC CGGACGAAGC TATATATTGA GAACGGAGAC GGACAGCGTC AGTGCGACGG TCACCGCGCT CAAGCATCAG GTCAACATCA ACAGCTTCGT GCGCGAGGCC GCGAAATCGC TGCAGATGAA TGAAGTCGGC GTCTGCAACA TCTCGACGCA AACGCCGATC GCTTTCGACG CCTATACGGA CAATCGAGCC ACAGGCAATT TCATCATCGT CGACCGGGTC ACGAATGCGA CCGTCGGCGC GGGGCTGATC GACTTTCCAC TCCGGCGTGC CGATAACGTC CACTGGCATG CGCTCGAGGT GAACAAGGTC GCGCGCAGCG CCATGAAGAA CCAGCTTCCT GCCGTTCTCT GGTTCACCGG GCTTTCGGGC TCCGGTAAAT CGACCATTGC GAACGAGCTG GACAGGATTC TCCACGCTCA GGGCAAGCAT ACCTATCTGC TCGACGGCGA CAATGTGCGT CACGGCCTCA ACCGGGACCT CGGCTTCACC GAAGAGGACC GGGTGGAGAA CATCCGTCGC GTGGCGGAGG TGGCGAAGCT CATGGCGGAT GCCGGTCTCA TCGTCCTCGT CTCCTTCATC TCACCGTTCC GGGACGAGCG GCGAATGGCG CGGGAATTGA TGGATGATGG CGAGTTCATC GAGATCTTCG TGGACACTCC GATCGAAGAG TGCGCGCGCC GGGACCCGAA GGGGCTCTAT GAGAAAGCTC TCGCAGGCAA GATCGCAAAC TTCACCGGCG TATCCTCGCC TTATGAGACC CCGGAAAACC CGGAGCTTCA TATCCGCACC GTCGGCCATG AACCGACCGA CCTGGCGCTC GCGATTGAGG AATTCCTCGA CCGCAGGATG GAGGGCAAAT GA
|
Protein sequence | MSYVQSIPPH DIEAHLVEHD NKSILRFITC GSVDDGKSTL IGRLLYDAKL IFEDQLANLG RVGSPGAANG KEIDLALLLD GLEAEREQGI TIDVAYRYFA TSKRKFIVAD TPGHEEYTRN MVTGASTADL AIILIDSRQG ILQQTRRHSY IASLLGIRHV VLAVNKIDLV DFRQQVYDEI VADYMAFAKE LGFASIRPIP ISARDGDNVI SASPNTPWYR GAALLEYLET VELEPMDQAK PFRFPVQMVM RPNADFRGYA GQISCGRISV GDPVVVAKTG QRTSVKAIVT YDGDLATAGE GEAVTLVLSD EVDASRGNML VAPGARPFVA DQFQAHVIWF DASPMMPGRS YILRTETDSV SATVTALKHQ VNINSFVREA AKSLQMNEVG VCNISTQTPI AFDAYTDNRA TGNFIIVDRV TNATVGAGLI DFPLRRADNV HWHALEVNKV ARSAMKNQLP AVLWFTGLSG SGKSTIANEL DRILHAQGKH TYLLDGDNVR HGLNRDLGFT EEDRVENIRR VAEVAKLMAD AGLIVLVSFI SPFRDERRMA RELMDDGEFI EIFVDTPIEE CARRDPKGLY EKALAGKIAN FTGVSSPYET PENPELHIRT VGHEPTDLAL AIEEFLDRRM EGK
|
| |