| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4558 |
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| Symbol | |
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| ID | 5318420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1044718 |
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| End bp | 1045947 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776359 |
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| Product | ROK family protein |
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| Protein accession | YP_001313291 |
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| Protein GI | 150376695 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.864466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA TTCGACCGGT CCGGGCCAAA AGCGGCACCA ATCAGGAAGG CGCGAGCGCC
CACAATCGCC GCGTGATGAT CGATGCTTTG CGACTGAACG GGCACCTGTC ACGGGCTGAT
CTTGCGCGGG CGACAGCACT CACCAAGCAG GCGGTCTCCA ACATCATAGA GGAGCTCGAG
AACGACGGGC TCGTGGCATC GCTCGCCGCA GTGCGCAAAG GCCGCGGGCA ACCATCGACA
CCCTATCGGC TCGTGCCGGA AGGCGCTTTT GCGATCGGAC TTCAGATCGA CCGTCACGTA
ACACGCACGA TCGCCGTCGA CCTGATCGGC GCCGTGCTGA TCCGTAAAGA GGTGAACCTG
CCCGGCGGCG GCCCTGAAGA GGGTGTCGAT GCAATCCTCG CTCTGATAGA CGAAACACGG
CGGGAACTGG TGACGACCGC TCCGGAATTC AACGACCGCC TGGTGGGGCT GGGCGTTGCA
ATGCCGGGAC CGTTCGGCAT CGACTCCGCT ACCGACGACC CCTGGATGAT GGCGGCGTGG
CAAAGCTTTC CCCTGCTTGA ACGACTTTCC GAGGGGACGG GGCTCGACGT GCGCCTTCAG
AACGACGCGG CTGCGGCGGC GACGGCGGAA AAGATGGTCG GTGCCGCCCA TGGGATCGAC
CATGCCGTCT GCGTTTATCT GGGCTACGGG CTCGGTGCGG GACTGATCCT GAACGGTGAA
CTCTACCGTG GCGGGCACGG TAATGCGGGC GAGATCGGCA TGATCCTGAG CAGGGCGCGC
GTCGGTGCCG ACGACGCGAG GGCACCGATC GAGCACCGCA TATCGATCGC TTCGCTGTGC
AAGGGCCTCG ACATTGACCC CGCCGATCCC GATCTTTACC GGCGCATCGA TGCTGCCGCC
GGCTCAAAGG ACAGGCGCGT GATGGACTGG ATTGCGGGCG CTGCCCACGA GCTTCGGGCG
ACGATACAGT TGCTCGAGAC GATTTTCGAT CCGCAAACGA TCATTCTCTG CGGCGGCATG
CCCCCCGTTC TCGCCAACCT CCTGATCGAC GCCCTTCACC CCCTGCTGCC TTCGATTGCC
GAGCGGCGGC AGCGCAGCAC GCCACGACTG CAGCTGGGCT TCACGGACCC ATGGGCGGTT
GCTGTCGGTG CTGCGGCCGA GCCGATCAGC CGGACGTTCG ACCCCCGGTT TTCGGCGATC
CTGAAGAGCC GGGTCGGTGG AACGCTTTGA
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| Protein sequence | MNEIRPVRAK SGTNQEGASA HNRRVMIDAL RLNGHLSRAD LARATALTKQ AVSNIIEELE
NDGLVASLAA VRKGRGQPST PYRLVPEGAF AIGLQIDRHV TRTIAVDLIG AVLIRKEVNL
PGGGPEEGVD AILALIDETR RELVTTAPEF NDRLVGLGVA MPGPFGIDSA TDDPWMMAAW
QSFPLLERLS EGTGLDVRLQ NDAAAAATAE KMVGAAHGID HAVCVYLGYG LGAGLILNGE
LYRGGHGNAG EIGMILSRAR VGADDARAPI EHRISIASLC KGLDIDPADP DLYRRIDAAA
GSKDRRVMDW IAGAAHELRA TIQLLETIFD PQTIILCGGM PPVLANLLID ALHPLLPSIA
ERRQRSTPRL QLGFTDPWAV AVGAAAEPIS RTFDPRFSAI LKSRVGGTL
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