| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4547 |
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| Symbol | |
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| ID | 5319048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1034975 |
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| End bp | 1035637 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776348 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001313280 |
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| Protein GI | 150376684 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.389255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTACT CCTTGAACTT CGCGGCTGTC TGGCGCTCGT TCGACCTTCT TCTGCAGGGA
TTGTCCCTCA GTCTCGGCCT GGCGGTCGTG GCGATCGTCG TCGGTTGCAT GATCGGGCTG
ATCACGGCTT TCGGGCTCGT TTCCAAGAGC GTGGCTCTGC GAAAGCCAGC CGGCTTCTAT
GTCACGGCGA TCCGCAACAC GCCGATTCTC GTGCTCGTCC TCTTCAGCTA TTTCGCGCTT
CCAGAACTCG GAGTTCGGCT CGGCAAAATC GAAAGCTTCG TGCTGACGCT TGCAATCTAT
TCGGGCGCAT ATCTTGCCGA GGTGTTTCGC GGCGGGCTCA TCGCCATACC GCCGGGCCAG
CGGGAAGCGG GGCTCGCGAT AGGGCTCACG GAAATGCAGA TCCGCACCTC GATCACCATT
CCGCTGATGC TCCGCAGCGT CCTGCCGTCG CTCGGCAGCA CGATAATCTC GCTTTTCAAA
GACACTTCGC TTGCCGCTGC GATTGCTGTT CCCGAGCTCA CTTTCGAGGC GCGCAAGATC
AATGTCGAGA GCTTCCGCGT TATCGAGACC TGGATTGTCG CGAGCTGCCT CTATGTCGCA
ACCTGCTCGC TGCTCGCCGC GCTTATGCGC GGTGTGGAGC GGCGTCTCGC TGTGCCGAGG
TGA
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| Protein sequence | MTYSLNFAAV WRSFDLLLQG LSLSLGLAVV AIVVGCMIGL ITAFGLVSKS VALRKPAGFY
VTAIRNTPIL VLVLFSYFAL PELGVRLGKI ESFVLTLAIY SGAYLAEVFR GGLIAIPPGQ
REAGLAIGLT EMQIRTSITI PLMLRSVLPS LGSTIISLFK DTSLAAAIAV PELTFEARKI
NVESFRVIET WIVASCLYVA TCSLLAALMR GVERRLAVPR
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