Gene Smed_4531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4531 
Symbol 
ID5317970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1018574 
End bp1019110 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content61% 
IMG OID640776332 
Productcarbohydrate kinase 
Protein accessionYP_001313264 
Protein GI150376668 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3265] Gluconate kinase 
TIGRFAM ID[TIGR01313] carbohydrate kinase, thermoresistant glucokinase family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTG AGTACAAATC AGAACCAAAT GCCCTACGGC GTTTTCCCGG CTCGATCGTC 
GTCATGGGGG TCTCCGGCAG CGGCAAATCG TCGGTAGGGG AGGCGATCGC CAAGGCCTGC
GGCTATCCCT TCCTCGAAGG CGACGCGCTC CATCCTGCAG AAAACATCAG GAAAATGTCC
GAGGGAGTTC CGCTCACCGA CGATGATCGC TGGCCCTGGC TCGATGCGAT AGGCGAGAGG
CTGGCAAGCC GGGAGCCGGT CGTCGTTTCT TGCTCCGCCC TTAGGCGCAT CTACAGGGAT
AAGCTTCGCG AAAGCGCTCC AAGGGGCTTG GCCTTCGTCT TCCTCTACGG CAGCGAGGCT
GTGCTCTCCG AACGGATGCA GCACCGCACG GGGCATTTCA TGCCGTCCTC ATTGCTTCAG
ACGCAGCTTG CGACGCTCGA AGATCCAAGA GGAGAAGCGA AAACGATCGC GGTGGATGTT
GCCCACCCCC TCGCGGAGAT TGTCCGCGAG GCGCTGGAAG GTCTCGCCCG TCTGTAA
 
Protein sequence
MSVEYKSEPN ALRRFPGSIV VMGVSGSGKS SVGEAIAKAC GYPFLEGDAL HPAENIRKMS 
EGVPLTDDDR WPWLDAIGER LASREPVVVS CSALRRIYRD KLRESAPRGL AFVFLYGSEA
VLSERMQHRT GHFMPSSLLQ TQLATLEDPR GEAKTIAVDV AHPLAEIVRE ALEGLARL