Gene Smed_4521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4521 
Symbol 
ID5318496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1007251 
End bp1007721 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID640776322 
ProductNUDIX hydrolase 
Protein accessionYP_001313254 
Protein GI150376658 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG4119] Predicted NTP pyrophosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.506364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA GAAGCGCGGG TATTCTGCTC TACAGATATG AGGCGGGCAA CCTCCTGGTT 
CTGCTCGTCC ACCCAGGGGG ACCCTTCTGG AGCAACAGGG ACGTCGGCGC CTGGTCGATC
CCGAAAGGCG AGTATGATGC CGCCGAAGAA CCCGAGGCGG CCGCGCGGCG GGAATTCCTC
GAGGAGACCG GGATCGCAAT CGGCGGTCCT CTGGAGTTCC TTGGTGAAGA GCGCCAGAAG
AGTGGCAAGC TCGTTACGGC TTACGCGCAT GAGAGTGAAT TCGACGTAGA CAGCCTGCGC
AGCAACGTGT TCGAAACAGA GTGGCCGCCG CGAAGCGGGC AAATGCAGTC CTTCCCCGAA
GTCGACCGCG CTGCATGGTT CACGCCTGCA GAGGCGCGCA GAAGGATAAA CGCCTCGCAG
CGGCCATTCA TCGATCGTCT GGAGGCGTTG CGAAGCCGCC GGGCGCCCTG A
 
Protein sequence
MPKRSAGILL YRYEAGNLLV LLVHPGGPFW SNRDVGAWSI PKGEYDAAEE PEAAARREFL 
EETGIAIGGP LEFLGEERQK SGKLVTAYAH ESEFDVDSLR SNVFETEWPP RSGQMQSFPE
VDRAAWFTPA EARRRINASQ RPFIDRLEAL RSRRAP