Gene Smed_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4512 
Symbol 
ID5318075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp996217 
End bp996804 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID640776313 
ProductNnrU family protein 
Protein accessionYP_001313245 
Protein GI150376649 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0981714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATAC TCCTTCTGGG CATCATCATA TTTCTCGGCA TGCACCTCAT CCGCGTGGTT 
GCGCCCGGCT TTCGGGCCGG CATCATCGAA AGCCGCGGCA AGGGCACATG GATGGGGCTC
TATACGATCG TCAGCCTCGT CGGTGTCTGT CTGATCATCT ACGGTTTCGG TCAGGCGCGT
GGCGAAACCG GGGTGCTATA CAATCCGCCG GAGTTTTTGC GCCATATCGC CCTTCTCCTG
ATGCTCATCG CCTTCATCGT GCTTGCTGCA GGCTTTCTGC CGGCGGGCCG CATCGCCGTG
GCGCTCAAGC ATCCGCAGGT CCTCTCGATC AAGATCTGGG CGCTCGCGCA CCTGCTTGCC
AATGGCGAGA CGTCCTCGGT GCTGCTCTTC GGGTCCTTTC TTGCATGGGC GGTGATCCTG
CGCATCTCGC TGAAAAGACG CGAGCGCGCG GGCGAGAAGG TGCTTCCGGT CTTCAAATCC
GGGCGCAACG ATGTTCTGGC GGTCCTCACA GGTCTCGCCG CATATGTGCT CTTTGTCTGG
AAGCTGCATG AGCTCGTGAT CGGCGTTCCG CCGGTCGTCA TCGGTTAG
 
Protein sequence
MAILLLGIII FLGMHLIRVV APGFRAGIIE SRGKGTWMGL YTIVSLVGVC LIIYGFGQAR 
GETGVLYNPP EFLRHIALLL MLIAFIVLAA GFLPAGRIAV ALKHPQVLSI KIWALAHLLA
NGETSSVLLF GSFLAWAVIL RISLKRRERA GEKVLPVFKS GRNDVLAVLT GLAAYVLFVW
KLHELVIGVP PVVIG