Gene Smed_4492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4492 
Symbol 
ID5319184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp976237 
End bp976599 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content61% 
IMG OID640776293 
Producthydroxyisourate hydrolase 
Protein accessionYP_001313225 
Protein GI150376629 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.182838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CGGGGCGCCT GACGACCCAT GTTCTGGACA CAGCCCTCGG CAGACCCGCT 
CAGGCAATGA GGATCGATCT CTATCGTCTG GAAGGCGAGG TGCGGCAGCT GATCCGTACG
GCCCGAACCA ATAGCGACGG CCGTATCGAC GAGCCGCTTG TCGAGGGTGT CGATTTCACC
AACGGCACCT ACGAACTGGT CTTCCATGCG GGCGAATATC TCAGGGCCAT GGACGTAGCG
CTTCCGGATC CCGCGTTCCT GGACCTGGTT CCGCTGCGAT TCGGTGTCGC GGACAGTCGA
AACCATTATC ACGTGCCGCT GCTGCTCTCA CCCTACGGCT ATTCCACCTA TCGCGGCAGC
TGA
 
Protein sequence
MSKTGRLTTH VLDTALGRPA QAMRIDLYRL EGEVRQLIRT ARTNSDGRID EPLVEGVDFT 
NGTYELVFHA GEYLRAMDVA LPDPAFLDLV PLRFGVADSR NHYHVPLLLS PYGYSTYRGS