Gene Smed_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4488 
Symbol 
ID5319180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp973034 
End bp973849 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID640776289 
Producthypothetical protein 
Protein accessionYP_001313221 
Protein GI150376625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.738838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACG CGATCTGTTT CACCCCGCCG ATGGGAGACC CGCTTTCTGT CACGGCTGCC 
AGTTGGCTCG GCCGCAGCGT GTACACCGGG GAGCCGGTGG AACTGCCGTC GATTGCCGGT
CTGGCCGTGT CAGATATAGC ATTTCACACC GCCGTTGCGC GCCGCTTCGG ATTTCATGCG
ATGATCATGG CGCCCTTCTG CCTGAGGCCC TGCATGGACG AAGCGCAGTT GCTCAAGGCC
ATGATGCTCT TCACGAGTGA CGAAACGCCT TTTGAAATCG AACGGTTGGA GGTCGCGCGT
CTCAGCCAGT GCTGGGGGCT GATGCCGCAG ATGCCGAGCC AGCCGATGCA TCTGCTCGCC
GCGCGCGTCA TCCAGGCGTT CGATCGGTTC CGCTCTCCAC TCAGTGAGGA AGACATCGAG
CGAGCGGACC CCGACAGGCT CACGGCTCCA CAGTTCACCA ATCTGCATCG GTGGGGCGAC
CCCCATGTGA TGGACGAGTA TCGTTTCCAC ATGGCTTTGA CCGGGCCCTT GAATGCCGAT
GCCGGACGCC GGGTGGAGGC ACCCTTGCGC CAACTTTTCG AGTCGTTGCT GATCGAACCC
CTTTTGATTG GCAGCCTGGC TCTGTTCATC GAGCACGAAC CCGGAGCTCC AATGCGCGTG
CATTCGCAGC ATCCGCTTGG CAAGGTTTCC GCGCGCCCGC GCGGCGACAA GGCCAGACAT
CTTGTTGCGG CGCGGTCAGT TCAGGATGAT GCCGCAACAC CGCCAGCCCC GGTGACGGCC
GGAATTTCCA GCGGCCTGGC GTTTAGAGCG GGATGA
 
Protein sequence
MRYAICFTPP MGDPLSVTAA SWLGRSVYTG EPVELPSIAG LAVSDIAFHT AVARRFGFHA 
MIMAPFCLRP CMDEAQLLKA MMLFTSDETP FEIERLEVAR LSQCWGLMPQ MPSQPMHLLA
ARVIQAFDRF RSPLSEEDIE RADPDRLTAP QFTNLHRWGD PHVMDEYRFH MALTGPLNAD
AGRRVEAPLR QLFESLLIEP LLIGSLALFI EHEPGAPMRV HSQHPLGKVS ARPRGDKARH
LVAARSVQDD AATPPAPVTA GISSGLAFRA G