Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4482 |
Symbol | |
ID | 5318347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 965440 |
End bp | 966849 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776283 |
Product | hypothetical protein |
Protein accession | YP_001313215 |
Protein GI | 150376619 |
COG category | [S] Function unknown |
COG ID | [COG2308] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCATTTG ACGAAATGAT CGATGCGGAC GGCAGCCCGC GCCAACCATA TTCGACCTAC CACCAATGGT ATTCAAATCA GGACAGAAAC CGGCTCATCG CAAAATCGAA GGAAGCCGAG AAGATCTTCC GTAAGACGGG CATCACCTTC GCAGTCTACG GACACGCCGA TTCCTCCGAG AAGCTCATTC CCTTCGATCT CATTCCCCGC ATCATCTCCG GCCGTGAATG GAGACGGCTC GCGCAAGGCA TTGAACAAAG GGTGCTGGCG CTCAACGCTT TTCTCGACGA CATCTACCAC AAACAGGAGA TCATTCGCGC CGGTCGCATC CCACGCGGAC TGATCGAGAA GAACGACACT TTCCTGCCGC AGATGATCGG CTTTCGCCCG TCGGGTGGCG TTTACACCCA CGTCGTGGGC ACCGATATCG TGCGCACCGG CGAAAATCAG TTCTATGTTC TGGAGGACAA TGCGCGTACG CCTTCGGGTG TCAGCTATAT GCTGGAGAAC CGCGAAACCA TGATGCAGAT GTTTCCGGAG CTCTTCCACC AGAACCGGGT GCGTCCGGTC GAGAATTATC CCTATCTGCT TCGCCAGAGC CTTTCGTCGC TCGCCCCTGC GGGCTGCAAC GGCAAGCCCC GCGTGGCCGT GCTGACCCCC GGCATCTACA ATTCCGCCTT CTACGAGCAT GCTTTCCTCG CGGACATGAT GGGTGTCGAA CTGGTCCAGG GTTCGGATCT GCGCGTCATC GACGGCAAGG TGAAGATGCG CACGACCCGC GGCTACGAGG CGATCGATGT TCTTTACCGG CGTGTCGACG ACGATTTCCT GGATCCGCTC ACCTTCCGAT CGGATTCCGC CCTCGGTATA CCGGGCATCA TGGATGTCTA CCGTGCCGGA AACGTCACGA TAGCCAATGC GCCCGGCACC GGCATTTCCG ACGACAAGGC CATCTACTCC TACATGCCGG AAATCATCGA GTTCTACACG GGGCGCAAGC CGCTGCTGGA AAACGTGCCG ACGTGGCGCT GCTCGGAGCC CGACAGCCTC AAATACGTGC TCGAGCATCT GGCTGAGCTC GTCGTCAAGG AGGTTCACGG CTCCGGCGGA TACGGCATGC TGGTCGGCCC GACGGCCACC AAGAAGGAAC GCGTAGTTTT TGCCGAAAAG CTCAAATCCC GCCCCGGCAA CTACATAGCG CAACCGACTT TGTCGCTGTC GACGGTACCG ATCATGGTAA AGAAGGGCAT TGCGCCCCGC CACGTCGACC TGCGTCCTTA CGTGCTCGTC TCCGACAAGG TTCAGATCAT TCCGGGCGGC CTGACTCGCG TCGCCTTGAA GGAGGGCTCT CTGGTGGTGA ATTCCAGCCA GGGCGGCGGG ACCAAGGATA CCTGGGTGCT GGAGGACTGA
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Protein sequence | MAFDEMIDAD GSPRQPYSTY HQWYSNQDRN RLIAKSKEAE KIFRKTGITF AVYGHADSSE KLIPFDLIPR IISGREWRRL AQGIEQRVLA LNAFLDDIYH KQEIIRAGRI PRGLIEKNDT FLPQMIGFRP SGGVYTHVVG TDIVRTGENQ FYVLEDNART PSGVSYMLEN RETMMQMFPE LFHQNRVRPV ENYPYLLRQS LSSLAPAGCN GKPRVAVLTP GIYNSAFYEH AFLADMMGVE LVQGSDLRVI DGKVKMRTTR GYEAIDVLYR RVDDDFLDPL TFRSDSALGI PGIMDVYRAG NVTIANAPGT GISDDKAIYS YMPEIIEFYT GRKPLLENVP TWRCSEPDSL KYVLEHLAEL VVKEVHGSGG YGMLVGPTAT KKERVVFAEK LKSRPGNYIA QPTLSLSTVP IMVKKGIAPR HVDLRPYVLV SDKVQIIPGG LTRVALKEGS LVVNSSQGGG TKDTWVLED
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