| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4478 |
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| Symbol | |
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| ID | 5318343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 960818 |
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| End bp | 962563 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776279 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001313211 |
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| Protein GI | 150376615 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.724246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AAGCTGAGTG GCCGCGCAAG CTCCGTTCGC AGGATTGGTT CGGCGGTACT
GGCAAGAATG CCATCATGCA TCGCTCCTGG ATGAAAAATC AGGGGCTTCC CGCTGACACT
TTTGACGGGC GGCCGATCAT CGGCATCTGC AATACCTGGT CCGAGCTCAC GCCGTGCAAC
GCGCATCTTC GCGACCTTGC AGAGCGCGTG AAGCGCGGGG TCTACGAGGC GGGGGGCTTC
CCGGTGGAAT TCCCCGTCTT TTCGACCGGG GAAAGCACAC TTCGCCCGAC GGCGATGATG
TTCCGCAACC TCGCGGCCAT GGATGTCGAG GAATCGATTC GCGGCAATCC GATCGACGGC
GTCGTGCTGC TCGGCGGCTG CGACAAGACG ACCCCCAGCC TCCTGATGGG AGCGGCCAGC
GTCGACATTC CGGCGATCGT CGTTTCCGGC GGTCCCATGC TCAACGGAAA GTGGCGCGGC
AAGGATGTCG GTTCGGGCAC CGCGATCTGG CAATTCTCGG AAATGGTCAA ATCCGGTGAG
ATGACGCTGG AGGAGTTCAT GGACGCCGAG CAGGGCATGG CCCGTTCCGC GGGAAGCTGT
ATGACCATGG GTACGGCCTC GACCATGGCG TCGATGGCCG AAGCGCTCGG CATGACCCTT
TCGGGCAACG CCGCCATTCC GGCGGTGGAT GCGCGCCGTC GGGTTATTTC GCAGCTTACC
GGACGCCGCA TCGTCGAGAT GGTCAAGGAG GATCTGAAGC CCTCCGACAT ACTGACCAAG
GAGGCATTCG AGAACGCTAT CCGCGTCAAC GGCGCCGTCG GCGGCTCCAC CAATGCGGTG
CTGCATCTTC TCGCGCTGGC AGGTCGCGTC GGCGTTGATC TATCGCTCGA CGACTGGGAC
AGGCTCGGCC GCGACGTGCC CACCATCGTC AACCTCCAGC CCTCCGGCAA GTATCTGATG
GAGGAATTCT ATTATGCCGG CGGCCTGCCG GTCGTGATCA AGGCGGTCGC GGAGATGGGC
CTGCTGCACA ATGATGCCAT CACCGTCAGC GGCGACACGA TCTGGAACGA CGTCAAGGGC
GTGGTCAACT ACAACGACGA CGTGATCCTG CCGCGGGAAA GGGCGCTCAC GAAATCGGGT
GGTATCGCAG TGCTGCGCGG CAATCTCGCG CCGCGCGGCG CCGTCCTGAA GCCATCAGCT
GCCTCGCCGA ACCTGATGCA GCACAAGGGC CGCGCGGTCG TTTTCGAGAG CATCGAGGAT
TATCACGCAC GCATCAACCG TGAGGACCTC GACATCGACG AGACCTGCAT CATGGTGCTG
AAATATTGCG GTCCCAAAGG CTATCCCGGC ATGGCCGAGG TCGGCAATAT GGGTCTGCCG
CCCAAGGTTC TGAAAAAGGG AGTGACGGAC ATGATCCGCA TTTCGGATGC GCGTATGTCG
GGCACGGCCT ACGGTACGGT CATACTCCAT ACCGCGCCGG AAGCGGCGGA AGGCGGTCCC
TTGGCGCTCG TGGAGAACGG CGATCTGATC GAGGTCGACA TCCCGAACCG CACGCTGCAT
CTCCATGTTT CCGACGAGGA ACTTGCGCGT CGCCGCGCGG CCTGGGTGTC GCCGGTCAAG
CCGCTGAGCG GCGGCTATGG CAGCCTCTAT ATGAAGACGG TCATGCAGGC CGACGCCGGC
GCCGATCTGG ACTTCCTTGT CGGCCCACGT GGCGATCGCA TTCCGATGGA TCGAGACAGC
CATTGA
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| Protein sequence | MKKKAEWPRK LRSQDWFGGT GKNAIMHRSW MKNQGLPADT FDGRPIIGIC NTWSELTPCN
AHLRDLAERV KRGVYEAGGF PVEFPVFSTG ESTLRPTAMM FRNLAAMDVE ESIRGNPIDG
VVLLGGCDKT TPSLLMGAAS VDIPAIVVSG GPMLNGKWRG KDVGSGTAIW QFSEMVKSGE
MTLEEFMDAE QGMARSAGSC MTMGTASTMA SMAEALGMTL SGNAAIPAVD ARRRVISQLT
GRRIVEMVKE DLKPSDILTK EAFENAIRVN GAVGGSTNAV LHLLALAGRV GVDLSLDDWD
RLGRDVPTIV NLQPSGKYLM EEFYYAGGLP VVIKAVAEMG LLHNDAITVS GDTIWNDVKG
VVNYNDDVIL PRERALTKSG GIAVLRGNLA PRGAVLKPSA ASPNLMQHKG RAVVFESIED
YHARINREDL DIDETCIMVL KYCGPKGYPG MAEVGNMGLP PKVLKKGVTD MIRISDARMS
GTAYGTVILH TAPEAAEGGP LALVENGDLI EVDIPNRTLH LHVSDEELAR RRAAWVSPVK
PLSGGYGSLY MKTVMQADAG ADLDFLVGPR GDRIPMDRDS H
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