| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4473 |
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| Symbol | |
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| ID | 5318175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 954054 |
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| End bp | 955121 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776274 |
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| Product | putative sugar uptake ABC transporter periplasmic solute-binding protein precursor |
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| Protein accession | YP_001313206 |
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| Protein GI | 150376610 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.659853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCT TTACTTCGCT TCTCGCAGCT GCGGCGATGA CGGTCGCCGG CTTCGCTGCG
CCGGCAGTCG CCCAGGACAA GGGCATGGTC GGCATCTCCA TGCCGACAAA GACGTCGACG
CGCTGGATTT CCGACGGCGA AACCATGGAG AAGCTGTTCA AGGATGCAGG CTATACGCCG
GACCTGCAAT TCGCCGACGA CGATATTCCG AACCAGCTCG CGCAGATCGA GAACATGGTG
ACCAAGGGCG CGAAGGTCCT CGTCATCGGC GCCATCGACG GCACGACGCT CTCCGACATT
CTGCAGAAGG CCGCCGACGC CGGCGTCAAG GTCATCGCCT ATGATCGCCT GATCCGCGAT
TCCGGCAATG TCGACTACTA TGCCACCTTC GACAACTTCC AGGTTGGCGT CCTGCAGGCG
ACCTCGCTCG TCGAGGGTCT GAAGCTCGAC AGCGCGACCG AGCCGAAGAA CATCGAACTT
TTCGGCGGCT CGCCGGACGA CAACAACGCC TTCTTCTTTT ACGACGGTGC AATGTCCGTT
CTGCAGCCTC TGATTGACAG CGGCAAGCTT GTCGTCAAGT CCGGCCAGAT GGGCATGGAC
CAGGTCGGTA CGCTGCGCTG GGACGGTGCT GTGGCTCAGG CCCGCATGGA AAACCTGCTG
TCGTCGGCCT ATACCGATGC GAAGGTCGAC GGCGTTCTGT CGCCCTATGA CGGACTGTCG
ATCGGCATCA TCTCTGCTCT CAAGGGCGTC GGTTACGGCT CCGGCGACAT GCCGATGCCG
ATCGTCACCG GTCAGGACGC CGAGCTGCCT TCGGTCAAGT CCATCCTTGC GGGCGAACAA
CATTCCACGG TCTTCAAGGA CACCCGTGAA CTCGCCAAGG TCACGGTCAA CATGGTCAAC
GCGATCATGG ACGGCAAGGA GCCGGAAGTT AACGACACCA AGACGTATGA AAACGGAGTC
AAGGTCGTTC CGTCCTATCT GCTGAAGCCC GTTTCCGTAG ACAAGTCGAA CGCCAAGGAC
GTTCTTGTCG GCTCCGGCTA CTACACGGAA GATCAGCTCA ACAACTGA
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| Protein sequence | MKFFTSLLAA AAMTVAGFAA PAVAQDKGMV GISMPTKTST RWISDGETME KLFKDAGYTP
DLQFADDDIP NQLAQIENMV TKGAKVLVIG AIDGTTLSDI LQKAADAGVK VIAYDRLIRD
SGNVDYYATF DNFQVGVLQA TSLVEGLKLD SATEPKNIEL FGGSPDDNNA FFFYDGAMSV
LQPLIDSGKL VVKSGQMGMD QVGTLRWDGA VAQARMENLL SSAYTDAKVD GVLSPYDGLS
IGIISALKGV GYGSGDMPMP IVTGQDAELP SVKSILAGEQ HSTVFKDTRE LAKVTVNMVN
AIMDGKEPEV NDTKTYENGV KVVPSYLLKP VSVDKSNAKD VLVGSGYYTE DQLNN
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