| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4467 |
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| Symbol | |
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| ID | 5318169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 947971 |
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| End bp | 949008 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776268 |
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| Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001313200 |
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| Protein GI | 150376604 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0159284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA TTTTGAAACT GATGGCCGGG GCTGCCATCA TAGCGTCCAT GCATTCCGCG
GCGATCGCCA AGGATCTCGT CATCGGCGTT TCCTGGTCAA ACTTCCAGGA GGAGCGCTGG
AAGACCGATG AGGCCGCCAT CAAGACCGCG CTGGAAGCCT CGGGCGACAA ATACATTTCG
GCCGATGCAC AGTCTTCAGC AGCAAAGCAG CTCACCGACA TCGAATCGCT AATCGCCCAG
GGCGCCAACG CACTGATCGT GCTTGCGCAG GACTCCGATG CGATCGGTCC GGCTATCGAG
AAGGCCGCTG CCGAGGGGAT CCCGGTCGTC GGCTATGACC GCCTGATCGA AAACCCGGCC
GCCTTCTACA TCACCTTTGA CAACAAGGAA GTCGGCCGCC TGCAAGCGAG CGAGGTGTTC
AAGCAGAAGC CGGAAGGCAA CTACGTCTTC ATCAAGGGCT CCTCCGCCGA TCCGAACGCC
GACTTCCTTT TCTCAGGACA GATGGAAGTC CTGAAGGATG CCATCGATGC GGGCAAGATC
AAGAATGTCG GCGAGGCCTA TACCGATGGC TGGAAGCCGG AAAACGCCCA GAAGAACATG
GAACAGTTCC TGACGGCTAA CGACAACAAG GTCGATGCGA TCGTGGCCTC GAACGACGGG
ACCGCCGGCG GCGCGATCGC GGCACTCGAC GCCCAGGGCC TTGCCGGTTC GGTTCCTGTG
TCCGGCCAAG ATGCCGACAA GGCAGCGCTG AACCGCGTCG CTCGCGGCAC GCAGACGGTT
TCGGTGTGGA AGGACTCCCG CGAACTCGGT AAGAAAGCGG CAGAGATTGC CGCGGCGCTT
GCCGCCGGCA AGACCATGGA TGAAATCGAA GGCGTCCAGA CCTTTGACGG CGGCCCCAAG
GGCGTGGCCA TGAAATCCGT TTTCCTGGCA CCGCTGGCGA TCACCAGGGA CAATCTCAAT
GTCGTCATCG ATGCCGGCTG GATTGCCAAG GAAGAGACCT GCCAGGGCGC CAAGGACGAC
GTGGCTGCGT GCAAGTAA
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| Protein sequence | MKSILKLMAG AAIIASMHSA AIAKDLVIGV SWSNFQEERW KTDEAAIKTA LEASGDKYIS
ADAQSSAAKQ LTDIESLIAQ GANALIVLAQ DSDAIGPAIE KAAAEGIPVV GYDRLIENPA
AFYITFDNKE VGRLQASEVF KQKPEGNYVF IKGSSADPNA DFLFSGQMEV LKDAIDAGKI
KNVGEAYTDG WKPENAQKNM EQFLTANDNK VDAIVASNDG TAGGAIAALD AQGLAGSVPV
SGQDADKAAL NRVARGTQTV SVWKDSRELG KKAAEIAAAL AAGKTMDEIE GVQTFDGGPK
GVAMKSVFLA PLAITRDNLN VVIDAGWIAK EETCQGAKDD VAACK
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