| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4466 |
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| Symbol | |
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| ID | 5318168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 946433 |
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| End bp | 947767 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776267 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001313199 |
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| Protein GI | 150376603 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGG CCGACATCAC ACAAGCCAAC CAGACACAGG GTACGCAAAC GAGCCGCGCC
CGAAAGGCGA ACGAAAACCT GGTGAAGCGA TTCTTCCGCG CCACTGAAAT CGACACCCGG
CTTCTCGGCA TGGTCGGCGC GCTGATCATC ATCTGGCTCG GTTTCCAGGT GATGACGGGA
GGATTGTTCC TCACGCCGCG CAACCTTTGG AACCTGACCG TCCAGACCTC ATCCGTCGCC
GTTATGGCCA CCGGTATGGT GCTCGTCATC GTGACCCGCA ACATCGACCT TTCCGTCGGC
TCCGTGCTCG GCTTTTGCGG CATGATCATG GGCGTGCTGC AGGCGCAGGT CCTGCCGCAA
TATCTCGGGC TCGGTCATCC CGCCATCTGG GCAATTACGC TTGCCTGCGG CATCGCGGTG
GGCGCCGCCA TCGGCGCGCT TCACGGATCG ATCATCGCCT TCCTCAACGT TCCCTCCTTC
ATTGTGACGC TCGGCGGCCT GCTCGTCTGG CGCGGCGCCA CCTGGTTTGT GACGAGCGGA
CAGACGGTCG CGCCGATGGA CACCACCTTC CGTCTCATGG GCGGCGGCAC CCAAGGTTCG
ATCGGCGCCA CGGCGAGCTG GGTCGTTGGC GTTCTCGCCT GTATCGCCAT CATCGGCGCC
GTCCTCAATT CGCGCAGGCA ACGCAAACGC TTCGGGTTTC CCTTGCGCCC GGTCTGGGCC
GAATACTTCC TGACAATCCT TGGCTGTGCC CTGGTGCTTG GCGCGGTCTC CGTCGCAAAT
CATTATTACT GGCCCATCAA TATCGCCCGC AGATATGCCG ATGCGAACAG CATTGCCTGG
CCGGACGGCG GCCTGCAGAT CCCGCACGGC ATCGCCGTTC CCGTACTGGT CGCGATCGTC
GTGGGCATCG TCATGACCTT CATAGCGACC CGCCTCCGCT TCGGTCGCTA CGTCTTCGCA
CTTGGCGGCA ATCCCGAAGC GGCCGAGCTC GCCGGAATCA AGACGCGCTG GGTCACCGTC
AAGATCTTCA TGCTGATGGG CGTGCTCTGC GCGATCGCTG CCGCCATCTC GACCGCGCGC
CTCAACGCAG CGACCAATGC ACAGGGCGAA CTCGACGAGC TCTACACGAT CGCTGCCGCA
GTCATCGGCG GCACTTCGCT CGCCGGCGGC GTCGGCACCA TCGCCGGGGC GATGATCGGC
GCCCTCGTCA TGCAATCGCT GCAGTCAGGC ATGGTGCTTC TCGGGATCGA CACGCCCTTC
CAGCGGATCG TCGTCGGTGT CGTGCTCGTC ACCGCCGTCT GGCTCGACAC CGTCTACCGC
GCCCGCGCAA AATAA
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| Protein sequence | MSMADITQAN QTQGTQTSRA RKANENLVKR FFRATEIDTR LLGMVGALII IWLGFQVMTG
GLFLTPRNLW NLTVQTSSVA VMATGMVLVI VTRNIDLSVG SVLGFCGMIM GVLQAQVLPQ
YLGLGHPAIW AITLACGIAV GAAIGALHGS IIAFLNVPSF IVTLGGLLVW RGATWFVTSG
QTVAPMDTTF RLMGGGTQGS IGATASWVVG VLACIAIIGA VLNSRRQRKR FGFPLRPVWA
EYFLTILGCA LVLGAVSVAN HYYWPINIAR RYADANSIAW PDGGLQIPHG IAVPVLVAIV
VGIVMTFIAT RLRFGRYVFA LGGNPEAAEL AGIKTRWVTV KIFMLMGVLC AIAAAISTAR
LNAATNAQGE LDELYTIAAA VIGGTSLAGG VGTIAGAMIG ALVMQSLQSG MVLLGIDTPF
QRIVVGVVLV TAVWLDTVYR ARAK
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