| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4461 |
|---|
| Symbol | |
|---|
| ID | 5317931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 942197 |
|---|
| End bp | 942637 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640776262 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_001313195 |
|---|
| Protein GI | 150376599 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4319] Ketosteroid isomerase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGAC TACTCACTGC CATTTTCGTC GCGTTCGGTA TTTGCCTCTT TTCGCTCGCC
TCTGCCAAGG CTGACCCGGG CGACGAAGTG AAGGCCGCCT ATTCGGCGTG GGACGCAGCA
TTCAACAATG CGGACGCAAA AGCCATCGCG GCGTTCTACA CGGACGACGC TATTTTCTTG
CCTGCCACCC ATGACGTGAT CAGGGGGCCT TCCGGAGTTG AGAAATTCTT TGGCGGCATT
TTCGGTATGG GCGTGACAGG TCACAAGCTT GAACTGATCG AGGCACAAGG CGAGGGCAAC
CTGCTGATCA GCACGGCGAA ATGGTCGGCC AAGGGCAAAG ACGCGAAAGG CGCTGACCAG
CCATGGGCTG GGGTCGCAAC CCATATGTTC GAGAAACAGG CAGACGGCGG CCTGAAACTG
AGAGTGCACA CCTTCAATTG A
|
|---|
| Protein sequence | MARLLTAIFV AFGICLFSLA SAKADPGDEV KAAYSAWDAA FNNADAKAIA AFYTDDAIFL
PATHDVIRGP SGVEKFFGGI FGMGVTGHKL ELIEAQGEGN LLISTAKWSA KGKDAKGADQ
PWAGVATHMF EKQADGGLKL RVHTFN
|
|---|
| |