Gene Smed_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4425 
Symbol 
ID5318138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp918013 
End bp918384 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content67% 
IMG OID640776228 
Producthypothetical protein 
Protein accessionYP_001313161 
Protein GI150376565 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.222644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.987297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAC TCCTGTTGAA GCGGGTCTAC GAGGCGCCGG AGGCGTCCGA CGGCATGCGC 
GTTCTCGTCG ACCGCCTTTG GCCGCGGGGC ATCGCCAGGG AGAAGGCTGA GATCGACCTC
TGGCTGAAGG ACATTGCCCC CAGTGACGCG CTACGGAAGC GCTTCCATGG GAAGCCCGAG
GATTGGGCCG CGTTTTGCGC GAACTATGCG GAGGAGCTCG AGGGCGCGGC GGCGCAGGCG
GCCGTCGTGG AGCTAGGCGG CCTGATGGCG CGCGGACCGG TAACGCTGCT TTACGCAGCG
CGCGACGAGG CGCGCAACAA TGCGGTTGCG CTGAAGGCAT GGCTGGTGCG GCGAGGGGTC
GAAGCTTCTT AA
 
Protein sequence
MASLLLKRVY EAPEASDGMR VLVDRLWPRG IAREKAEIDL WLKDIAPSDA LRKRFHGKPE 
DWAAFCANYA EELEGAAAQA AVVELGGLMA RGPVTLLYAA RDEARNNAVA LKAWLVRRGV
EAS