Gene Smed_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4417 
Symbol 
ID5318981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp909645 
End bp910454 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID640776221 
Productmethyltransferase type 11 
Protein accessionYP_001313154 
Protein GI150376558 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.587336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TGGCAACGCG GGCGAATTAT GATCTTCGCG ACGAAATTAA AGCCTACTGG 
TCGGAACGCG CGGCCACTTT CGACCTTTCT CCCGGCCATG AGATTTTTTC GGAAGAGGAA
CGCGCTGCCT GGCATCGGCT CATCCTGCGG CATCTCGGCG AAGGAGCCGG CCGCGCGGCG
CTCGACCTTG CGAGCGGGAC AGGGGTGGTC TCGCACCTCC TCGACGATCT CGGCTTCCGG
GTGACCGGCA TCGACTGGGC TGAACCGATG CTCGACCGCG CACGGCAGAA GGCAAAGACC
AGGGGGCGCA ATATTTCCTT CCGCATGGGA GACGCGGAAA ATACAATGGA GCCGGACGAT
CACTACCATG TCGTCGTCAA CCGGCATCTC GTATGGACTC TGGTGGACCC GTCCGCGGCC
TTCAGGGAAT GGCTGCGTGT GCTCAAGCCA GGCGGAAGCC TGCTGATCGT CGATGGCGAT
TTCGTCAATG CGACCCGGCT CGAACGGTTC TTTTCCTCGC TCAACGCCTG GGGCCAGCGT
GTCGGGCTTC TCAGACCCGA CGCGCCGTCC CAGCCCCGTG AGATGCTGGA AACGCACCGC
AGCATTCTGG CTCGCGTCCA CTTCTCGCAA GGCGCGCGCG CCGAAGCCGT TGTCGATCTG
CTGCATGCAT CCGGCTTCAC CGACATAAGG GTGGACACCG ATCTCGGAGA AATACACAGG
ATGCAGGCGA AGAACTGGAA TCTGTTCAAG GGCCTTGCGC GGAGAAGCCA GCACCGTTTT
GCGATCCACG CGAGCAAACC AGCAGCGTGA
 
Protein sequence
MSDVATRANY DLRDEIKAYW SERAATFDLS PGHEIFSEEE RAAWHRLILR HLGEGAGRAA 
LDLASGTGVV SHLLDDLGFR VTGIDWAEPM LDRARQKAKT RGRNISFRMG DAENTMEPDD
HYHVVVNRHL VWTLVDPSAA FREWLRVLKP GGSLLIVDGD FVNATRLERF FSSLNAWGQR
VGLLRPDAPS QPREMLETHR SILARVHFSQ GARAEAVVDL LHASGFTDIR VDTDLGEIHR
MQAKNWNLFK GLARRSQHRF AIHASKPAA