Gene Smed_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4416 
Symbol 
ID5318980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp908796 
End bp909239 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID640776220 
Producthypothetical protein 
Protein accessionYP_001313153 
Protein GI150376557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.740709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCC GCTACACACT CGTTGCATCG CTGACCGTTG CAGCCTCCAG CTTAATGCTT 
CTCAACCCCG CTTCGGCACT CGAACTCGCG CAGGCGCAAC AAGCGCCCGC TCAGACGCAG
CCACAGGCGC TGCCCGACGC CGGCGGCACG AGCGCACCAA TCAGCGAACA GAAGATCGAG
GCCTTCGCCG TCGCCTATCT TCAGGTCGAC AAGGTAAGGC AGGAATATTC CACGAAAATT
GGCGCTACTA CTGACGAGGC AGCGAAGACA AAGCTCCAGA ACGAAGCCAG CCAGGAAATG
GTCAAGGCCG TTGAAACCTC GCCGAACATG TCGGTGGAGG AATATACGAC GATCCTGAAA
GCGGCCCAAA GCGACCCGGC ACTTGCGCAG AAGGTTCAGG AAAAGCTTCA GACGTCCGCG
CCGCAGCAGC CGCAGCAACA GTAG
 
Protein sequence
MITRYTLVAS LTVAASSLML LNPASALELA QAQQAPAQTQ PQALPDAGGT SAPISEQKIE 
AFAVAYLQVD KVRQEYSTKI GATTDEAAKT KLQNEASQEM VKAVETSPNM SVEEYTTILK
AAQSDPALAQ KVQEKLQTSA PQQPQQQ