| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4410 |
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| Symbol | |
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| ID | 5318123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 904990 |
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| End bp | 906108 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776214 |
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| Product | putative DNA topoisomerase I protein |
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| Protein accession | YP_001313147 |
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| Protein GI | 150376551 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.017671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGAG CAATGTCGGT CGACGTGCTG GAATGTCGAC CTGCCGGGCT CGCCGATCTC
CCGCAGCGGC TCGCGGCGAT CGGGTCTGTG CCCGAGGAAA CTGGGCTCGT CTACGTCAGC
GACAGCGAGC CGGGTATTCG GCGCCAAAGA CGTGGCAAAG GGTTCGCGTA TCGCATGCCG
GACGGATCGA TCGTTACCGA TCCGTCTGTT AAAAGCCGCA TAGCGGCACT GGGATTACCG
CCTGCCTATG AGAACGTCTG GATCTGCCTT GACGAACGAG GCCACCTGCA GGCCACCGGC
TATGATGCGC GCGGCCGAAA GCAGTATCGT TATCACAGCG AATGGCAGGC CCTCAGGAGC
GCCGACAAAT TTGCGCAACT GACGGAATTC GGCAAAGCTT TGCCTAAGAT ACGCCGCACC
ATACGGCGCC ACATGCAGGG CGGCGTGGAA AACATGCAGA CCGTGCTTGC GGCGCTCGTG
GCCCTGCTGG ACGAAGCGCA TCTGCGCACC GGCAACCAGG CTTATGTGCA GGCCAACGGA
AGTTATGGCG CAACCACTTT GCTGAAGCGG CATCTCAGAC TTGGCGACGG CTTTATAGAA
TTGAAATTCA CCGGAAAGGG TGGCAAGCGC GTTCAGCGGG TGCTCCGTCG CCCGAAGTTG
CAGCGACTGC TCGAAGAAAT AGCCGATCTC CCGGGCAGGC AGCTTTTCGT CTGGAAGGAT
GAAAACGACG CGCTTCGACC GGTCGATTCC GGCCGGCTCA ACCGGTATCT CACGGACATG
GCCGGCACAG CGATCTCGGC AAAGACATTC CGAACATGGG GCGGCACTCT CGCCGCTTTC
ACGGTCGCGC GGACCTCGAT CGAGCGGGGT GAGTGGCCGA CGATCAAACA GATGAGCGAG
GCGGCTGCAT CCGTGCTTCA CAACACGCCC GCAATCAGCC GGAGCAGTTA CATTCATCCG
GATGTGCTCG CCCTTGCCGA CAAGTCGGCC CCGGTCTCCG CGCGGCAGCT TCAGGCGCGT
GGGCGTTCAG GAAGTGAATT GCGTGTGGAG GAACAGCGTT TGCTAGGCTT TCTTCAGCGC
AGCGCGGGGA CGAAAAAGCG CCTGCCCTTG CCCCAGTGA
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| Protein sequence | MARAMSVDVL ECRPAGLADL PQRLAAIGSV PEETGLVYVS DSEPGIRRQR RGKGFAYRMP
DGSIVTDPSV KSRIAALGLP PAYENVWICL DERGHLQATG YDARGRKQYR YHSEWQALRS
ADKFAQLTEF GKALPKIRRT IRRHMQGGVE NMQTVLAALV ALLDEAHLRT GNQAYVQANG
SYGATTLLKR HLRLGDGFIE LKFTGKGGKR VQRVLRRPKL QRLLEEIADL PGRQLFVWKD
ENDALRPVDS GRLNRYLTDM AGTAISAKTF RTWGGTLAAF TVARTSIERG EWPTIKQMSE
AAASVLHNTP AISRSSYIHP DVLALADKSA PVSARQLQAR GRSGSELRVE EQRLLGFLQR
SAGTKKRLPL PQ
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