Gene Smed_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4406 
Symbol 
ID5318119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp899493 
End bp900215 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID640776210 
Productputative glutathione S-transferase protein 
Protein accessionYP_001313143 
Protein GI150376547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.407172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATACA AACTCTATTA CTGGGACGGT ATTCCAGGCC GCGGTGAATT CGTGCGCCTT 
GCGCTGGAAG AGGGAGGAGC GGATTACGTC GATGCTGCCC GCGAGCCGGG GGGCACGGAT
GAAATGCTGA AGCTGATGAA GGCGCCTGGC GGGGCCGCTC CTCCCTTTGC TCCGCCGTTC
CTCGTCGATG GCGATCTGCT TATCGCCCAC GTCGCCAACA TTCTATTCTA TCTCGGGCCG
AGGCTCGGCC TTGCACCCGA GGGCGAAGGG CTTCGCACCA TTGCTAACGG TCTGCAGCTG
ACGATCACCG ATTTTGTTGC GGAAATCCAC GACACCCACC ACCCAATCGG CGTATCGCAC
TATTACGAGA GCCAGAAGCC CGAAGCGCTG CGGCGCGCGG CCGATTTCCT ATCCGAGCGC
CTGCCGAAAT TCCTCGGCTA TTTCGAACGA GTCCTTTCGC AGAATTCGAG CGGGCCGAAC
CAGATGGTCG GCGACCGGCT GAGCTACGTC GATCTTTCGC TCTTCCAGGT GATCGAGGGA
CTTCGCTATG CCTTTCCAAG GGCGATGGAC GCCTATGAGG CGAACATTCC CCGCTTGGTT
GACGTGCATG ATGCCGTGCG GGTCCGGCCG CGAATTTACA GCTATCTCGC CTCGGAGCGG
CGGCTGGCCT TCAACGAGTC CTGTATCTTC CGCCACTATC CCGAACTCGA CAGGCAGTCC
TGA
 
Protein sequence
MSYKLYYWDG IPGRGEFVRL ALEEGGADYV DAAREPGGTD EMLKLMKAPG GAAPPFAPPF 
LVDGDLLIAH VANILFYLGP RLGLAPEGEG LRTIANGLQL TITDFVAEIH DTHHPIGVSH
YYESQKPEAL RRAADFLSER LPKFLGYFER VLSQNSSGPN QMVGDRLSYV DLSLFQVIEG
LRYAFPRAMD AYEANIPRLV DVHDAVRVRP RIYSYLASER RLAFNESCIF RHYPELDRQS