Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4405 |
Symbol | |
ID | 5318118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 898827 |
End bp | 899342 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640776209 |
Product | hypothetical protein |
Protein accession | YP_001313142 |
Protein GI | 150376546 |
COG category | [S] Function unknown |
COG ID | [COG4297] Uncharacterized protein containing double-stranded beta helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.55111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCG AAGAGTTCAT ATTCGCCGAA AGCGGCGGCG TACCGAACAA TCCGCGCTTG CCCGTGCTGG TCTACCGCCA GGCGATCGAC GTTACCGAAA ATGCAGCCAC ACGGATCGAA CAACGCTTCC GGGCCAATGG TTGGCTCGGT CTCTGGCGCA ACGGGGTCTT TGCCCATCAC CACTACCATT GCGGTGCTCA CGAGGTTCTC GGGATTGCTG AAGGCCGGGC GCGCCTCCTC ATCGGCGGGC CGGGTGGCCG GGAAGTCGAG GTCGCAGCCG GCGACGTCAT TCTCCTTCCC GCGGGAACCG GCCACCGCCG CGACGAGGCG AGCGCCGACT TCCTCGTTAT CGGCGGTTAT CCGCCGGAGC AACACGCCGA TATCAAAAGC GGCGCCGCGA CGGCGGATGA CCGTATCGCG ATCGACGCGG TGCCGTTGCC TCGCTTCGAC CCGGTTCTCG GCGCAGAGGG ACCAGCCGTC ATCGTCTGGC ACTCCGCAAT GCATGCACGG AGCTGA
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Protein sequence | MKVEEFIFAE SGGVPNNPRL PVLVYRQAID VTENAATRIE QRFRANGWLG LWRNGVFAHH HYHCGAHEVL GIAEGRARLL IGGPGGREVE VAAGDVILLP AGTGHRRDEA SADFLVIGGY PPEQHADIKS GAATADDRIA IDAVPLPRFD PVLGAEGPAV IVWHSAMHAR S
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