Gene Smed_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4387 
Symbol 
ID5318357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp882020 
End bp882529 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content61% 
IMG OID640776191 
Producthypothetical protein 
Protein accessionYP_001313124 
Protein GI150376528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.973925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAG TTTTCATGGT AGCTATACCC GCCGGCGTGA CTTGCTGGCG GTACCGACAT 
CGCGAGAGCG CCGTAAACTC TCGCCAGAGG GGCCCGGCAC CAATGTTCAT CCCGCATTCC
GATGTCCAAG AGCGGGACGC TTCTTACTTA GCGATGCCGC GCTGTGCGTC AAGGGGGCAG
CCGCGCGCTT GCGGCGGAAC CAAAAGCCTA TGTCCCAAGT TTTATTTCCG ACCGGCAACA
ACCGCGAGGC TTGGCGTCAT GCATTGTTTC TGGTGGGATA AGAGCGTTGA ACTGGAACTC
GGAGCCGAAG GCAAATATCG CGACGTGAAA AGCACGCGGG AGGCCGTAGA ATGCCTGTCG
CAGCGCTGGC CGCAGCGGGA CGGCCGCGCG CTGGCCGCGG CGAAGCGGGT GTGTCTCCAG
GCTCTCGAAG GCAAGGTTGG AGCGGAGAAG GCCCGCAGGG CCTTCATAAA GGCAGCGGAA
GAGGCACATA TATCGATCCG CAGCCATTAG
 
Protein sequence
MRSVFMVAIP AGVTCWRYRH RESAVNSRQR GPAPMFIPHS DVQERDASYL AMPRCASRGQ 
PRACGGTKSL CPKFYFRPAT TARLGVMHCF WWDKSVELEL GAEGKYRDVK STREAVECLS
QRWPQRDGRA LAAAKRVCLQ ALEGKVGAEK ARRAFIKAAE EAHISIRSH