Gene Smed_4382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4382 
SymbolfabG 
ID5318352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp879687 
End bp880469 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID640776186 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001313119 
Protein GI150376523 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.691791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAA CATCCACCGT TGCCTTGGTC ACCGGCGCCG GGTCCGGCAT CGGCCGAGCC 
ACTGCTCTGG CACTCGCCTT GGACGGCGTG AAAATCGGAG CGCTGGGGCG CACAGGATCG
GAGGTTGAGA CAGTCGCCGG CGAAATCGCC AAGGCCGGCG GCGAGGCGAT GGCGCTTGAG
GCGGACATTT CCGACGAACT GCAGATGCGC AATGCGGTCA ACGGCCTCGT CGGCAAGTTC
GGTCATCTCG ACATCGTTGT CGCGAATGCC GGTATTAACG GAGTCTGGGC TCCGATCGAC
GACCTGAAGC CGTTCGAATG GGACGAGACG ATCGCCGTCA ATCTGCGCGG CACCTTTCTC
ACCCTGCACT TGACCGTCCC CCATCTGAAA CAGCGCGGCG GCGGGTCCAT CGTGGTTGTT
TCCTCGATCA ACGGCACGAG GACCTTTACG ACGCCCGGCG CTACAGCCTA TACCGCCACC
AAAGCAGCAC AGGTTGCGAT GGTCCAGCAA TTGGCGCTCG AGCTCGGCAA ACACCACATC
CGCGTCAACG CTGTCTGTCC CGGTGAGATC GAAACGAACA TCGACGACAA TACGAAACTG
CGCCACGAAG AAGAGACGGC CATTCCCGTT GAATGGCCGG ACGGACAGGT GCCTATCTCC
GACGGGCAGC CGGGGCGCAG CGAAGACGTG GCGGAGGTCA TCCGTTTCCT GGTCTCAGAC
CGCGCTCGCC ACGTGACCGG AAGCCCAGTC TGGATCGACG GCGGCCAGGG TCTCCTGCGA
TAA
 
Protein sequence
MNRTSTVALV TGAGSGIGRA TALALALDGV KIGALGRTGS EVETVAGEIA KAGGEAMALE 
ADISDELQMR NAVNGLVGKF GHLDIVVANA GINGVWAPID DLKPFEWDET IAVNLRGTFL
TLHLTVPHLK QRGGGSIVVV SSINGTRTFT TPGATAYTAT KAAQVAMVQQ LALELGKHHI
RVNAVCPGEI ETNIDDNTKL RHEEETAIPV EWPDGQVPIS DGQPGRSEDV AEVIRFLVSD
RARHVTGSPV WIDGGQGLLR