Gene Smed_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4379 
Symbol 
ID5317988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp878268 
End bp878744 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content60% 
IMG OID640776183 
Productsignal-transduction protein 
Protein accessionYP_001313116 
Protein GI150376520 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.817612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC ATGACGATAG GATGGTCCGC GTCCGGGACG TGATGTCCCG GCAGGTTTTC 
ACCGTGTCAC CCACTGACAG CGCGCAATCC GTCGCCCGGC TGATGGCTGA GACGGGTGTT
GGCGCGGTGC CCGTGGAGAC GCCGGGTGTA GGAACGATCC TGGGAATCGT CACGGATCGG
GACATAGTCA CGTCCGTCGT CGCGAAAGGC CTTTCCAGTT CAACGGCCGT TTTCGAATTC
ATGACGGTGT CGGCAGAATC TTGCGAGGAG CACGACAGCC TCCTCCTTGC TGCTCAGAAG
ATGCACGATC TGCGTATTCG TCGTCTCGTC GTTGTCAATG AGAAGCGGCA GGCCGCCGGC
ATAGTGGCTC TCGCCGACAT CAGCCGAGTC AACCCGGAAC TCGGCGGCCT CGTTCTCGAG
GGAATCAATC GGCCTGTGCC CGTTGAGTCA CGTCTTGAAG GAATGTCAAC ATGCTGA
 
Protein sequence
MAGHDDRMVR VRDVMSRQVF TVSPTDSAQS VARLMAETGV GAVPVETPGV GTILGIVTDR 
DIVTSVVAKG LSSSTAVFEF MTVSAESCEE HDSLLLAAQK MHDLRIRRLV VVNEKRQAAG
IVALADISRV NPELGGLVLE GINRPVPVES RLEGMSTC