Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4379 |
Symbol | |
ID | 5317988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 878268 |
End bp | 878744 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776183 |
Product | signal-transduction protein |
Protein accession | YP_001313116 |
Protein GI | 150376520 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.817612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCC ATGACGATAG GATGGTCCGC GTCCGGGACG TGATGTCCCG GCAGGTTTTC ACCGTGTCAC CCACTGACAG CGCGCAATCC GTCGCCCGGC TGATGGCTGA GACGGGTGTT GGCGCGGTGC CCGTGGAGAC GCCGGGTGTA GGAACGATCC TGGGAATCGT CACGGATCGG GACATAGTCA CGTCCGTCGT CGCGAAAGGC CTTTCCAGTT CAACGGCCGT TTTCGAATTC ATGACGGTGT CGGCAGAATC TTGCGAGGAG CACGACAGCC TCCTCCTTGC TGCTCAGAAG ATGCACGATC TGCGTATTCG TCGTCTCGTC GTTGTCAATG AGAAGCGGCA GGCCGCCGGC ATAGTGGCTC TCGCCGACAT CAGCCGAGTC AACCCGGAAC TCGGCGGCCT CGTTCTCGAG GGAATCAATC GGCCTGTGCC CGTTGAGTCA CGTCTTGAAG GAATGTCAAC ATGCTGA
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Protein sequence | MAGHDDRMVR VRDVMSRQVF TVSPTDSAQS VARLMAETGV GAVPVETPGV GTILGIVTDR DIVTSVVAKG LSSSTAVFEF MTVSAESCEE HDSLLLAAQK MHDLRIRRLV VVNEKRQAAG IVALADISRV NPELGGLVLE GINRPVPVES RLEGMSTC
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