Gene Smed_4369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4369 
Symbol 
ID5318392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp869711 
End bp870112 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID640776173 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_001313106 
Protein GI150376510 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC ATGCATCTTC GCACGAGGAC GCTTTCGAGG CGCATCACGG TCACAGCCAT 
GGTCACGGCG CGGGTCACGG CACGCTGAAG AGCTACGTGA CCGGCTTCAT TCTCTCAGTC
CTCCTGACTG CCATCCCCTT CTGGCTGGTC ATGGCCGACG TGCTCGAAAG CGCCATTCTC
ACCGCCGCGA TCATCATGGC GCTCGGCGCC ATACAGATCG TCGTCCACAT GATCTTCTTC
CTGCATATGA ACACACGCTC GGAAGGCGGA TGGACGATGA TGGCGCTGAT CTTCACCATC
GTCCTCGTCG CCATTGCACT TTCCGGCTCG CTCTGGGTCA TGCATCATCT GAACACCAAC
ATGATGCCGA TGAGCCCGGA AATGATGAAG AACATGCCCT GA
 
Protein sequence
MSTHASSHED AFEAHHGHSH GHGAGHGTLK SYVTGFILSV LLTAIPFWLV MADVLESAIL 
TAAIIMALGA IQIVVHMIFF LHMNTRSEGG WTMMALIFTI VLVAIALSGS LWVMHHLNTN
MMPMSPEMMK NMP