Gene Smed_4368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4368 
Symbol 
ID5318391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp868854 
End bp869609 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID640776172 
ProductSurfeit locus 1 family protein 
Protein accessionYP_001313105 
Protein GI150376509 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT TGCAAAACGA AACCGCCTTT CGCCCGCGCT CGCGGCTGGC AGTGGTCAGT 
ATTCTCGGTC TCCTGTTGAT CGCCGGCCTG CTCGCGCTCG GCACCTGGCA GGTCAAGCGT
CTCTTCTGGA AGCTCGATCT TATCGCGCGG GTCGAACAAC GCATCGGTGC TCCCCCCGTC
CCTGCACCGC CCAGAAGCGA TTGGCCGAAT GTCAGCCCGG CACGCGACGA ATACCGGCAC
GTAGCGCTGC ATGGCCGCTT TCTCAACGAC GAGGAAACGC TGGTCTATGC CGCGACCGAA
CTCGGTGCCG GCTACTGGGT CATGACGCCG CTTGCGCTTC ACGATGGCAC GATCGTACTC
GTGAACCGCG GTTTCGTGCC AATGGAGCGG CGCGACCCTA AGGCGCGTCA GCAGGGCCGG
ATCGAAGACG AGGTCAAGGT CACCGGGCTG ATGCGCATGG ACGAGCCGAA AGGTTCTCTG
CTCCAGTCGA ACAGACCCCG CGAAGACCGT TGGTACTCGC GCGACGTCGG CGCCATAGCC
GCAGCGCGGG GCCTTTCCCC CGTTGCGCCC TACTTCGTCG ATGCCGACGC GTCTTCCATT
CCTGGGACGC TTCCCGTCGG CGGGCTGACG CGCGTCGTCT TTCCCAACAA TCACCTGGTC
TACGCGTTGA CCTGGTATTG TCTCGCAGCC ATGACGGCGG GAATGCTGGT GATTTTCTGG
CGCTCGGCGC GGAAATCGAA CTCCGGCGCG GCGTGA
 
Protein sequence
MTDLQNETAF RPRSRLAVVS ILGLLLIAGL LALGTWQVKR LFWKLDLIAR VEQRIGAPPV 
PAPPRSDWPN VSPARDEYRH VALHGRFLND EETLVYAATE LGAGYWVMTP LALHDGTIVL
VNRGFVPMER RDPKARQQGR IEDEVKVTGL MRMDEPKGSL LQSNRPREDR WYSRDVGAIA
AARGLSPVAP YFVDADASSI PGTLPVGGLT RVVFPNNHLV YALTWYCLAA MTAGMLVIFW
RSARKSNSGA A