| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4354 |
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| Symbol | |
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| ID | 5318203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 852461 |
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| End bp | 853792 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776159 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001313092 |
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| Protein GI | 150376496 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.201605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.814699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCG GGAGCTACGC AGAGGCCGAG CGGACGAGTG GATCGACGGC ACGTGTCGGG
ACCGCCCTCT TCATCGCGAT TTTCCTGTTC TTCTGGATTT CCATCAACCC CTTCGTGGAC
TTGACCGGCG AGGCGGTGCT GGATCCTTCC GCCGGAAATT CCAACCGGCT GAACCAGATC
ATCTCGCTCC TGCTTTTCGC CGGCATGCTC TGTTACGGAC TGATCCATCC CTTGCGGGAA
ACTATTCTGC GGCCCCGGTT GCTGCTGGCG ATCCTCTATT GTTGGTTCAT CGTCGTTTCG
CTGATCTCGG CTCATCCGAT GCTCGGCATC AAGGGCGTGA TCCTTTCCGT AATGGTCACC
GTCAATGCCA GCATCTACCT CTTGCTGCCC ACTTCGGAAC GCCACTTCGC CAGGATGCTC
GGTATCGCCA TCCTCGTCAT GCTGAGCGTC GCCTATTACG GCATCGTCTT CAACCCGTCG
CTCGCCATCC ACCAAGCCAC GGAACTGCGC GAACCGATGA ATGCAGGTTT GTGGCGAGGT
CACTTCCCTC ACAAGAACAG CGCCGCGGCT GCGATGGTGA TCGCAGCCTT CATCGGCCTC
TTCGTCATGA ACGCCTGGTC GCGCGTCGCC GGCATCGCCA TCGTCGCGCT TTCCTTCGTC
TTCCTCGTCA ATACCGGGGG GAAAACGTCT ACGGCAATGC TGCCGGCGAT TCTGCTGGTC
GCCTTCCTTT TCGAAAAGGT GCGCTTCCTT CGCATCCCGA TTGCCGTTGG CGGCGTCGGC
CTGTTCAATC TGTTCGCCGT CGGCTCGGCC GTCATTGTTC CCTTGGGTGA ATTCATCAAC
GGTCTCGGCG TTGACGCAAC CTTTACCAAT CGCGCCGATA TCTGGCGTTT CGCCTTCGGC
GCGCTCGCCG AACAGCCCCT CACAGGATAT GGCTTCAAGG CTTTCTGGCA GACGGAAGAA
CTCGTCTATA GCGGCGGCAC GGTTGAGACC TGGGCCGTCG CGGCCGCCAA CGGACATAAC
TCCTACCTCG ATATCGCCCT GATGACGGGA TTTCCCGGAC TCGCCCTGAC CCTGATCTGG
ATACTCTTCC TACCGCTCCG CAACATTGCG CGAATCGCTC CGGAGCGCGA ACACACGCAT
CTGACGAGGC TCTTCGTTCG CATATGGCTC TACACGATCT TCAATGCCGG CCTCGAGAGC
CTCTTCTTCG AGGGAGGAAG CCTTCTGTGG TTCACGTTCA TGGTCGCGCT CTACGGACTT
TCCCTGCAAT CCAGCGCGGA ACTCGCGGCC GTTCCGGCGC GCGCTCGTGA GGGGAGGCTC
GTGCATGCTT GA
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| Protein sequence | MDRGSYAEAE RTSGSTARVG TALFIAIFLF FWISINPFVD LTGEAVLDPS AGNSNRLNQI
ISLLLFAGML CYGLIHPLRE TILRPRLLLA ILYCWFIVVS LISAHPMLGI KGVILSVMVT
VNASIYLLLP TSERHFARML GIAILVMLSV AYYGIVFNPS LAIHQATELR EPMNAGLWRG
HFPHKNSAAA AMVIAAFIGL FVMNAWSRVA GIAIVALSFV FLVNTGGKTS TAMLPAILLV
AFLFEKVRFL RIPIAVGGVG LFNLFAVGSA VIVPLGEFIN GLGVDATFTN RADIWRFAFG
ALAEQPLTGY GFKAFWQTEE LVYSGGTVET WAVAAANGHN SYLDIALMTG FPGLALTLIW
ILFLPLRNIA RIAPEREHTH LTRLFVRIWL YTIFNAGLES LFFEGGSLLW FTFMVALYGL
SLQSSAELAA VPARAREGRL VHA
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