Gene Smed_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4348 
Symbol 
ID5319218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp845260 
End bp845991 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID640776153 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001313086 
Protein GI150376490 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.303724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGCA AAATGCAATT ACAAAGGCGC ACGTTCCTTC TCGGAGCGAT GTCCGCAACC 
GCAGCCCTTG CGGGATGTAC CACGTCGATG CCCGCGACTG AGCGCGCTCC CGTGCCGCGT
CTGGTGAGCC GCCCGCTGGG GTTGCCGGGC GATGCCGAAC TGGAAGCCCG GTATGCAGCC
GTGGAAGATG GCGGGCACCT GATCCCGGCC GTTCCCTACA GACAAATGGA TCCGAAATAT
CTTCGCCAGC GTGTACCGGA TCCGACCGGC GAACCGGCGG GAACCGTCGT GGTCGATACG
CCCGGGCGCT ATCTTTATCT TGTCGAGCCC GGCGGGACGG CGATGCGCTA CGGAGTGGGA
ATTGGCCGGG AGGGATTTGC CTGGGAGGGC GATGGAATCA TCCATTGGCG CCAAGCCTGG
CCGCGCTGGA AGCCGCCGGC CGAGATGATC GCCCGCAGGC CGGAGCTTGC GGAATATTCG
GTCGAGAACG GCGGCATGGC GCCGGGCATC AAGAACCCCT TGGGAGCGCG CGCGCTTTAC
ATCTTTCAGA ACGGGCGGGA CACGCTCTAT CGCCTGCACG GTACGCCTGA GTGGAACTCG
ATCGGCAAGG CGACATCGTC GGGATGCGTC CGCCTCGTCA ATCAGGACGT CATCGATCTT
TACAAGCGCG TGCCCTATCA CGCGCGGATA GTTGTCTATC AGACGCCGCT GATTGCGCAG
GGCCAGGCCT GA
 
Protein sequence
MFSKMQLQRR TFLLGAMSAT AALAGCTTSM PATERAPVPR LVSRPLGLPG DAELEARYAA 
VEDGGHLIPA VPYRQMDPKY LRQRVPDPTG EPAGTVVVDT PGRYLYLVEP GGTAMRYGVG
IGREGFAWEG DGIIHWRQAW PRWKPPAEMI ARRPELAEYS VENGGMAPGI KNPLGARALY
IFQNGRDTLY RLHGTPEWNS IGKATSSGCV RLVNQDVIDL YKRVPYHARI VVYQTPLIAQ
GQA